Amaranthus tricolor (tampala): 130802396
Help
Entry
130802396 CDS
T09367
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130802396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130802396
03036 Chromosome and associated proteins [BR:
atri03036
]
130802396
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130802396
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130802396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130802396
NCBI-ProteinID:
XP_057522388
LinkDB
All DBs
Position
2:5841371..5858049
Genome browser
AA seq
996 aa
AA seq
DB search
MFGSSNPFGQSPSASFGTQFPFGQSNPNSNPFAPKPFGAVNAFGSPTGGSMFGSTSTGVF
GQSSSPLSSTPVFGATSSPGFGSSNPAFGSTSSSFGGSFGQKPAFGNFGSGTQASPFGSS
FQQSQPSLGSNLFGGTSPFGAPSQPSFGGATTPAFGSSTTPSFGGASTPTFGVTNSAFGS
TPSPVFGNTGSAFGASTTPAFGSGGAFGSANTSVFGAGNGAAFGATTTSAFGATSTPAFG
VSSTPAFGASASTPAFGTANSSTPSFSFGSTPAFGQTTSTFGSTGFGSTPSPFGASSSPF
GASTSSTFGGAVGQSNLGGSRVTPYQPSPEVDGGSSSTGGPGKLESISAMPAYKDKSHEE
LRWEDYQRNDKGGPSPAGQSTPGLNFGASPSTAQSSPFATSTFGQPTSNPFGTPAPAQSN
PFGAKPSVFGATTTSTFGSSPFGSITTPSAFGSTPTPTSTIFGGSTPAFGSGTAPSLFST
GSSSAIGSSSIFGSTPAQGGTTTFGSSLSFGNTQPSSLFQSSPSLGTGNTFGQTSSALGQ
SPGFGQNPFNNASGFGSNLFSNSTGSQFGFPQNNPSLSSAFQPSFPTQTASGFNLNTFGQ
ASSGVNSGLGASNLFGQGLGQSSSNQISAVAQPVAVTNPFGTLPAMPHMSIGNAGTSPSI
QYGISSMPIVDKPNPVRIFSFLTSRHLSQRRIRLPTRKYHPKNDGSRVPFFSDDDEAPST
PKADALFVPRENPRALIIRPVPKSSKETCVLGQENGKTSEESGHPQTGSIADVNGSIANG
NGLIKEQRNPVKTNQKPGTDGTLNHKGDSYITLSGHRAGEAAIVYEHGADIEAMMPKLRH
SDYYTEPRIQELAAKERAEPGYCRRVKDFVVGRHGFGSIRFLGETDVRRLDLESLIQFND
REVIVYMDESKKPPVGQGLNKPAEVTLLNIKCYNKKTGTQILEGPRLEKYKEMLKQKAEE
QDAEFISYDPVKAEWKFRVNHFSKYVLCDDNTWDMD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaagtaacccttttgggcaatcacctagtgcatcatttggaacccaattt
ccttttgggcaaagcaatcctaatagtaatccttttgctccaaagccttttggagctgtg
aatgcttttggttcgcccaccggaggttcaatgtttggcagcacctcaactggtgtgttt
ggtcaatcatcatcaccgttgtcttcaacaccagtgtttggcgctacttcatcaccaggg
tttgggagttcgaatcctgcttttggcagcacatcgtcatcttttgggggttcttttggc
cagaagcctgcttttggaaattttggctctggtactcaagcaagtccatttggaagctca
tttcaacaatcacaaccttcattgggtagcaatttattcggtggtacgtcaccatttggt
gcaccaagccaaccttcatttggtggtgctactacccctgcttttggatcatcgactaca
ccatcatttggtggtgcaagcaccccaacttttggagttaccaattcagctttcggttca
acaccaagtccggtttttggaaatacaggatctgcttttggtgcctcaacgacacctgca
ttcgggtctggaggtgcatttggttcagcaaacacctctgtctttggcgctggaaatggt
gctgcctttggtgctactaccacatcagcatttggtgctacaagcactccggcatttggt
gtttcttctacaccagcttttggtgctagtgctagcactccagcatttgggacagcaaat
tccagcaccccatcttttagttttggctccacgccagcctttggtcaaactacatctacg
ttcggtagcactggttttggatctacgccgtccccatttggtgcctcaagctctcctttt
ggagcatctacttcaagcaccttcggtggtgctgttgggcagtcgaatttgggaggaagt
agagttactccataccaaccgtctccagaagtcgatggaggtagtagtagcactggtgga
cctggaaagttagagtcaatatctgccatgccagcttacaaagacaaaagccatgaagag
ctgaggtgggaggattaccaacgtaacgataaaggtggcccttctcctgctgggcaatct
actccggggttgaactttggtgcatctccttctactgctcagtccagcccttttgctaca
tcaacgtttggacagccaacatctaacccctttggaacaccagcacctgcacaatcgaat
ccatttggtgcaaaaccttcggtatttggtgctacaactacttcaacatttggctcttct
cctttcggttctataacaacaccctccgcttttgggtcaactccaacgccaacgtcaacc
atttttggagggtctactccagcatttggatcaggcactgccccttctctttttagtact
ggtagctcttcagctattggatcttcgtctatatttggttctacacctgctcaggggggt
accacaacttttggttcttctttaagctttggtaatacgcagccatcatctttgtttcag
tcgtccccatcacttggaaccggaaatacttttgggcaaactagttctgcccttggacag
agtcctgggtttggtcaaaatccgtttaataatgcatctggatttggatcaaatttattt
tccaactccacaggcagccaatttggctttcctcaaaacaatccttctctttcatctgct
tttcaacccagttttcccacacagacagctagtggtttcaacttaaatacctttggacag
gcatcgtcaggtgtgaacagcggccttggtgcatcaaacctctttgggcaaggtcttgga
cagtcttcttccaatcagatctctgcagttgcacagcccgttgcagtcacaaatcctttc
gggacccttccagcaatgcctcatatgtctattggcaatgctggaacctcaccatccatt
caatatggaatttctagcatgcctatcgttgataagcctaaccctgtaagaattttttcc
tttttaacatcacgccatttatctcagaggcggatcaggctacccacaaggaaatatcat
cccaaaaatgatggttctagggttccattcttcagtgatgatgatgaagcacctagcacg
ccgaaggcagatgctctatttgttcccagggaaaatcctagagccttgattattcggcct
gtgccaaaatcttcgaaggaaacatgcgtcttgggacaagagaatggtaaaacatctgaa
gaaagtggacatcctcagactggatctattgcagatgtaaatggcagcattgccaatggt
aatggattgataaaagaacaaagaaatcctgtgaaaaccaaccagaaacctggtactgac
ggtactttgaatcataaaggagattcatacattacactttcaggccacagagctggtgag
gcagcaattgtatacgagcatggggctgacattgaggcaatgatgcctaagctccgacac
tctgattattacacagagcctcggatacaagagctagctgccaaagaaagggctgaacca
ggttactgcagacgtgtaaaagattttgtagtgggtcgacatggttttggaagcattagg
ttcctaggggagactgatgtaagacggcttgatctcgagtctctaatccagttcaatgat
cgcgaagtgattgtttatatggatgagagtaaaaaacctccagttggtcaaggtctcaac
aagcctgccgaagtaactctgcttaacatcaaatgttacaacaaaaagacgggaactcaa
atcttagaaggaccaagacttgaaaaatacaaggagatgctgaagcagaaagcggaagaa
caagacgcggaattcatatcttatgatccagtaaaagcagagtggaaattcagagtcaat
cacttcagcaaatatgtgctttgcgacgataatacgtgggatatggattga
DBGET
integrated database retrieval system
