Amaranthus tricolor (tampala): 130802459
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Entry
130802459 CDS
T09367
Name
(RefSeq) DNA-directed RNA polymerase subunit beta-like
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130802459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130802459
03400 DNA repair and recombination proteins [BR:
atri03400
]
130802459
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130802459
Transcription machinery [BR:
atri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
130802459
DNA repair and recombination proteins [BR:
atri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
130802459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
130802459
NCBI-ProteinID:
XP_057522484
LinkDB
All DBs
Position
1
Genome browser
AA seq
560 aa
AA seq
DB search
MKMDGECPIQLIGPCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC
HSIPAGAENPSLPRLCYWRLWGSRNRRALILGWAYYLDAFSSYPLRTWLPSVYRGHDNCP
TLGTYYSPRWRRADIESNFYPLSDGPSTRHRRITNNFEDAVLISERLVYEDIYTSFHIRR
YEIQTYVTSQGPEKVTSEIPHLEAHLLRNLDKNGIVRLGSWVETGDILVGKLTPQMAKES
SYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIHVYILQ
KREIKIGDKVAGRHGNKGIISRILPRQDMPYLQDGRPVDMIFNPLGVPSRMNVGQIFECS
LGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDG
RTGDPFEQPVIIGNPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEV
WALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTITNPEDAPESFRLLVRELRSLA
LELNHFLVSEKNFQINRREA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatggcgagtgcccgatccaattgatcgggccatgtaggaacaaggttcaa
gtctatcggtctgttaggatgcctcagctgcatacatcactgcacttccacttgacacct
atcgtaatgataaacggctcgtctcgccgtgaccttctcttgaattctcaaaacttctgt
cactccatccccgcaggggcagagaacccgtcgctgcctcggctgtgctattggcggctc
tggggaagtcggaataggagagcactcatcttggggtgggcttactacttagatgctttc
agcagttatccgctccgcacttggctacccagcgtttaccgtgggcacgataactgccca
acccttggaacatactacagccccaggtggcgaagagccgacatcgagagtaacttttat
ccgttgagcgacggcccttccactcggcaccgtcggatcactaacaattttgaagatgcg
gtactcattagtgagcgtcttgtgtatgaagatatttatacttcttttcacatacggaga
tatgaaattcagacttatgtgacaagtcaaggtcctgaaaaggtcactagcgaaatacca
catttagaagctcatttactccgcaatttagacaaaaatggaattgtgaggctgggatcg
tgggtagaaacaggtgatattttagtaggtaaattaacgcctcagatggcaaaagaatct
tcgtatgctccagaagatagattattacgagctatacttggcattcaggtatccacatca
aaggaaacttgtctaaaactgcctatagggggtagggggcgagttattgatgtgagatgg
atccagaaaaaggggggttctagttataatccagaaatgattcatgtatatattttacag
aaacgtgaaatcaaaataggtgataaagtagctggaaggcatggaaataagggtatcatt
tccagaattttgcctagacaagatatgccttatttgcaagatggaagacccgttgatatg
atctttaacccattaggagtaccgtcacgaatgaatgtaggacagatatttgaatgttcg
ctcgggttagcggggagtctgctagatagacattatcgaatagcaccttttgatgagaga
tatgaacaagaggcttcgagaaaactagtgttttcggaattatatgaagccagtaagcaa
acagcgaatccatgggtatttgaacccgagtatccgggaaagagtcgaatatttgatgga
agaacgggagatccttttgaacagcctgttataataggaaatccttatatattgaaatta
attcatcaagttgatgataaaatccacggccgttctagtggacattatgcacttgttaca
caacaaccccttcgaggaagagccaagcaaggaggacagagggtaggagaaatggaggtt
tgggctctagaaggatttggtgttgctcatattttacaagaaatgcttacttataaatcg
gatcatattaaagctcgccaagaagtacttggtactacgatcattgggggaacaataact
aaccccgaagatgctccagaatcttttcgactgcttgttcgagaactacgatctttagct
ctggaactgaatcatttccttgtatctgaaaaaaacttccagattaataggagggaagct
taa
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