Amaranthus tricolor (tampala): 130802619
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Entry
130802619 CDS
T09367
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130802619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130802619
Spliceosome [BR:
atri03041
]
Common components
Common spliceosomal components
SR proteins
130802619
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
DUF2457
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130802619
NCBI-ProteinID:
XP_057522610
LinkDB
All DBs
Position
2:6266260..6276350
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AA seq
247 aa
AA seq
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MSSRFSRTIYVGNLPADIKEHEVEDLFYKYGRILDIELKLPPRPPCYCFVEFESSRDAED
AIRGRDGYKFDGCRLRVELAHGGRGSSSVSERRSGGRYGASRRTEYRVIVRGLPSSASWQ
DLKDHMRKAGDVCFVEVSRDSEGTFGLVDYTNSEDMKYALRKLDDTEFKNPWAKSYIRVK
KYDESPTRSRSRSRSPKRIRSRSPERSISRSPSRSRSASPVKSTRPKSRSRSRSRTPSKS
RSGSGSP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtttttctcgtaccatctatgttggcaacctacctgccgatatcaaagaa
catgaggttgaagatttattctacaagtacggtcgtatattggatattgaattaaaactt
ccacctcgacctccttgttattgcttcgtggagtttgagagttctcgtgatgcggaggat
gctattaggggacgtgacggctacaaattcgatggttgtcgcctaagggttgaacttgca
catggtggtcgaggatcatcatctgttagtgaacgtcgtagtggagggcgctatggtgca
tctcgtcgtactgagtatcgagtgattgttcgaggactaccatcttctgcatcgtggcag
gacttaaaggatcacatgcgaaaagctggcgatgtttgcttcgtggaagtttcacgtgac
agtgaaggaacctttggtttggttgactataccaactctgaagacatgaaatatgctctc
cggaaattggatgacactgaattcaaaaatccctgggcaaaatcttatattcgggtgaag
aaatacgatgaaagccctactaggagtcgcagcaggagtagaagcccaaaaaggatcaga
agcagatcaccagaaagatcaatctctaggtcaccttctcgatcaaggtctgcatctcct
gtgaaatcaaccaggccaaagtctagatccaggtctaggtcgaggaccccttcaaagtca
cggtcagggtctggatctccttaa
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