Amaranthus tricolor (tampala): 130802664
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Entry
130802664 CDS
T09367
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130802664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130802664
Enzymes [BR:
atri01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
130802664
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130802664
mRNA degradation factors
5'-3' decay
Decapping complex
130802664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
130802664
NCBI-ProteinID:
XP_057522656
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Position
16:complement(10115865..10130097)
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AA seq
330 aa
AA seq
DB search
MMSGLHRCSSAPLKNGLPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNT
VEKNPSLKSFSLKEFTSLMFNSCEVLKPYVPHIDDIFKDFKSYKVRVPVTGAIILDQTYE
RCILVKGWKGTSWSFPRGKKSKDEEDHACAVREVLEETGFDVSGLLSKEEYIEVIFGQQR
VRLYIIAGVTDDTAFAPLTKKEISEIAWQRLNDLQPASDDVISHSVTGLKLYMVAPFLKS
LKSWISKHAPPVASKSDSSHRGFSVWKAKNSSLGSSSTSVDNQHTKPISDPHVAETGPSP
VDETGPGKSFRNFSFNTGSIIQAMESAFSS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagggcttcatagatgttcaagtgctccattgaagaacggccttcctcctcaa
gagcttctcgatgatctctgcagtcgctttgtcttgaatgttccaaaggaagatcaacaa
tcatttgagagaatcttgtttttggttgagtacgcgcattggttctatgaggataataca
gttgagaagaatccatctttgaaatcgttttcccttaaggaatttacttctttaatgttt
aacagttgcgaggtattgaaaccctatgttccacacattgatgatatattcaaggacttc
aagtcatacaaagttcgggttcccgtcactggagcaatcattttggaccaaacttatgaa
aggtgcattttggttaaagggtggaaaggaaccagctggagttttccacgaggaaaaaag
agtaaggatgaggaggatcatgcatgtgccgtgagagaagttctggaggaaacgggattt
gatgtgtctggacttctttccaaagaagagtacattgaagtgatatttgggcagcagcgt
gtgcgcctttatataattgctggtgttactgatgacactgcctttgctcctcttactaaa
aaggagatcagtgaaattgcttggcaacgactgaatgatctccagcctgcaagtgatgat
gtgatatcacatagtgtcacgggacttaagctttacatggttgctccatttttgaagtca
ttaaaatcatggatttcaaaacatgctcctcctgttgcttcaaaatcggactcttctcat
agaggcttcagtgtttggaaggcaaaaaatagttctttgggaagcagctcaacctcggtt
gacaaccagcatacgaagcctatatccgatcctcatgttgctgaaactggtcccagtcct
gttgatgaaactggccctggcaaaagctttagaaacttcagttttaatacgggatcgatc
atacaagccatggaatcagcattttcttcttga
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