Amaranthus tricolor (tampala): 130802778
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Entry
130802778 CDS
T09367
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130802778
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atri01007
]
130802778
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130802778
Enzymes [BR:
atri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
130802778
Amino acid related enzymes [BR:
atri01007
]
Aminoacyl-tRNA synthetase
Class I (G)
130802778
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130802778
Prokaryotic type
130802778
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
DALR_2
CysS_C
Motif
Other DBs
NCBI-GeneID:
130802778
NCBI-ProteinID:
XP_057522826
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All DBs
Position
16:complement(7282043..7290616)
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AA seq
582 aa
AA seq
DB search
MVLLVRFCKPFLPPHLSPLSFSKTALQFPSQFSKNTKNYAIHKRVRLFSTLGCSQASING
NNTNNNLVGDSNTGELESGIKKEFWLFNTMSRKNELFKPKVDGKVGMYVCGVTAYDFSHI
GHARVYVTFDVLYRCLKYLGYEVFYVRNFTDVDDKIIVRANELGENPISLSSRFCDEFLQ
DMTFLHCLPPSVEPRVSDHIPQIIDMIKQIIDNGFAYCVDGDVYFSVHKFPEYGRLSGRK
LEDNRAGERVAIDSRKRDPADFALWKTAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGY
NFDIHGGGMDLMFPHHENEIAQSCAACSESHIRYWVHNGFVTINSEKMSKSLGNFFTIRQ
VIELYHPLALRLFLIGTHYRSPVNYSDVLLETASERIFYIYQTLYDSQVLLSAHGRANLK
DSFPPDIASCINDFQNGFLIAMLDDLHTPVVLAALSDPLKTINDLLHTRKGKKREMRMES
LAALEKTINNVLTILGLMPSSYAEALHQLKEKALVRAKLSEADVKKKIEERDAARKNKEF
EKSDAIRKDLAVVGIGLMDSPEGTTWRPVLPTALQQEPATAN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtactccttgtgaggttctgtaaaccctttctcccaccccatctttcccctctttct
ttctccaaaaccgcacttcaattcccttctcaattctccaaaaacaccaaaaactacgca
atccacaaaagggttcgtttgttttctacattgggttgttctcaggcttctatcaatggt
aacaataccaataataatttggtgggtgattccaatactggggaattagagagtggaatc
aagaaagaattttggttgtttaatacaatgagtaggaaaaacgagttgtttaaacctaaa
gtggatggcaaagttggaatgtatgtgtgtggagttactgcttatgattttagtcatatt
ggtcatgctagagtttatgttacctttgatgttctatacaggtgtctcaagtatttgggt
tatgaagtcttttatgttcgtaacttcactgatgttgatgacaagataattgttagagcc
aatgaacttggagagaatccaatatcacttagcagtcgtttctgtgacgaatttcttcaa
gacatgacttttcttcattgtttacctccttcagttgaaccccgtgtctcggatcacata
ccacaaattatagacatgattaagcagattatcgataatggttttgcctactgtgtggat
ggagatgtttacttctctgttcataagtttcctgaatatggacgattgtctgggcgaaaa
ttggaagacaatcgagctggtgagcgagtggctatcgattcaagaaagagagatccagct
gattttgcgttatggaaaactgctaaagaaggagagcccttttgggaaagtccatggggt
cctggaagacccggctggcatattgaatgtagtgctatgagtgctgcttatttggggtac
aatttcgacatacatggtggtgggatggaccttatgtttcctcaccatgaaaatgaaata
gctcaaagctgtgctgcttgtagtgaaagtcatataaggtattgggttcataacggattt
gtcactattaattcagagaaaatgtccaaatctcttggaaacttctttacaatccgtcag
gttattgagctttatcacccacttgccttgagactcttcttgataggaactcactatcgt
tctccagtaaattactctgatgtattactagaaactgcttcagaacgcattttttacatc
taccagacattatacgatagccaagttcttttgagtgcgcatgggagagctaatttaaag
gactcattcccccctgatattgcaagctgcataaacgatttccaaaatgggtttttgatt
gcgatgttagatgatcttcacacgcctgttgttcttgctgcactttctgacccattgaag
accatcaatgatcttctccatactcgtaagggaaagaagcgagagatgcgaatggaatca
cttgcagccttagagaagacaataaacaatgttctgactattctcgggttgatgccatcg
agttatgccgaggctctacatcaactcaaagagaaggctctggtgcgtgccaagttatct
gaagctgacgttaagaaaaagatagaagagagagacgccgcgaggaaaaataaagaattt
gagaagtcggatgcaataagaaaagacttagctgttgtgggtatcggtctgatggacagc
ccagaagggactacctggagaccagtacttcctactgcactacagcaggagccagcaacg
gctaattga
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