KEGG   Amaranthus tricolor (tampala): 130802794
Entry
130802794         CDS       T09367                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130802794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130802794
Enzymes [BR:atri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     130802794
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     130802794
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 130802794
NCBI-ProteinID: XP_057522850
LinkDB
Position
16:complement(7485666..7492993)
AA seq 1210 aa
MGLEGKGGLGSSSNGKELFDDIDMEMLWDDEDSEDDVDVMDMDLHDLGEVSLMNFCKKAS
SAFFKQYGLINHQITSYNTFVRSGIQKVFDAIGEITINPGYDPSKKGEDGWRYASIRFGK
VELERPMFWTGEKFHADGGKDYINLLPRHARLQNMTYSARLKVETHLQIYSQEKVKSDKF
KTGKSEYVDKRILKDVTTDVIVGRIPVMVKSDICWMSEIEKGDCEFDHGGYFIVKGAEKA
FIAQEQSCLKRLWISNDPYWKVQYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSVV
EVPIWILFFALGVQSDKEVVELIDCDTDDGRISNILFASIHDADEKCEGFRVKPKDMDFS
PRAMEFIDKAVRESKFPPEESTREFIDTNLFPSLSGNKQKARFLAYMVKCLLQAFSGRRK
CDNRDDFRNKRLELASELLERELRVHMRHAEKRMVKAMQRDLYGDRDLHAIEHYLDASIV
TNGLTRAFSTGAWAHPFKKSDRVSGVVANLRRTNPLQSICDMRKSRQQVSYTGKVGDARY
PHPSHWGKLCFLSTPDGENCGLVKNIAATGLVSSNIMKEEYLLLLDTMVNCGMEKLVNDT
STSLSGKDKILVDGEWVGVCVNSLSFVQELRKKRQRRRLPSQVEIKRDVQNAEVRIFCDT
GRILRPLLVVENLKKIKLLKGSDFSFETLLDKGIIELIGAEEEEDCHTAWGIKFLFEDKG
KDVKYTHCELDMSFLLGISCGIIPFANHDHARRVLYQSEKHSGQAIGFSSTNPNIRVDTL
SHQMYYPQKPLFRSAISDSLGNSLGNQILPKAEFFNGQNGIVAVNVHLGYNQEDSIVMNR
ASLERGMFRTEHIRSYKAEVDNNESSDKRRKFDDTVSFGKIQSKIGRVDSLDDDGFPFIG
ANLHSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLG
DKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC
GGTLRYSTPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRSLIFMGPTFYQRLIH
MAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDS
SQMHVCRRCKNLANVIQRAVPGGKKIRGPYCRFCETLDDIVKVSVPYGAKLLCQELFSMG
ISLRFETDLC
NT seq 3633 nt   +upstreamnt  +downstreamnt
atgggacttgaggggaaaggtggactaggaagcagtagcaatggtaaagaattgtttgat
gatattgacatggagatgttgtgggacgatgaagattcagaggatgatgttgatgtcatg
gacatggatttgcatgatcttggtgaagtttccttgatgaacttttgtaagaaagcttca
tcagccttctttaagcaatatggtctcatcaatcatcaaatcacttcatacaataccttt
gtccgcagtggtattcagaaagtgtttgatgccattggtgagattaccatcaatccaggt
tatgatccgtcaaagaagggcgaggacggatggagatatgcttcaatcagatttgggaag
gtggagcttgagcgtccaatgttttggacaggggagaagttccacgctgatggtggtaaa
gattacatcaatttgcttccccgacatgctcgccttcaaaacatgacttattcggcaaga
ttgaaagttgagactcaccttcagatttattcacaagagaaggtcaaaagtgacaaattc
aaaactgggaagtccgagtatgtagacaagaggatactgaaagatgttaccactgatgtc
attgttggaagaatcccagtaatggtaaagtctgatatctgctggatgagtgaaattgaa
aaaggtgattgtgaatttgatcatggtggctattttatagtcaagggtgctgagaaggca
ttcattgcacaagaacagagctgcttgaagaggctgtggatttctaatgatccctactgg
aaagtgcaatatcgttctgagttcaagaggagaagggtgcatgttaaattagtggagaac
ccgaaagctgaaaatatccaaggaggagaaaaagtcattagcgtgtacttctcagtggtg
gaggttcctatttggattcttttctttgccctgggtgtgcagtcggacaaggaggtggtg
gaattgattgattgtgacactgatgatggtcgcataagtaatattctgtttgcgtcaatc
catgatgctgacgagaagtgtgagggctttcgtgtcaaacccaaggatatggattttagt
cccagagctatggagttcatcgacaaagctgtacgagaaagcaaatttcctcctgaggaa
tccactagagaattcattgatactaaccttttccctagtctttcgggaaacaagcagaag
gcccgttttcttgcatatatggtgaagtgtctgttgcaagcattttcaggaaggagaaag
tgtgataatagggatgattttcgaaataagcgactggagttggcttctgagctgttggaa
agagaacttagggtccacatgaggcatgctgagaagcggatggtgaaagctatgcagcgg
gacctttatggggaccgtgatttgcatgctattgagcattacttggatgcatcaatagtc
acaaatggtctgacaagagccttttccactggggcatgggcacatcctttcaagaagtca
gacagggtttctggtgtagtggcaaatctgaggcgaactaatccgttacaaagtatttgt
gatatgaggaaatcccgtcaacaggtttcgtacacaggaaaggttggggatgcccgatat
ccacatccctctcattggggaaaactctgcttcctgtctaccccggatggtgagaactgt
ggtctggtgaagaatattgctgcaactggacttgtcagtagcaatattatgaaggaggaa
tacctattacttcttgacacgatggttaactgtggaatggagaagctagtaaatgacaca
tctacatcgctgagtggaaaagacaagattctagttgatggtgaatgggtcggagtgtgt
gtaaattccctctcctttgttcaggaattaaggaaaaagcgtcagaggcggcgtttgcca
agccaggttgaaatcaaacgagatgttcagaatgcagaagtgcgaatattctgtgatact
gggagaattcttcgaccccttttagtagttgaaaatttgaagaagataaagttattaaaa
gggagtgatttttcttttgaaacacttctagacaaaggaattattgaattgatcggggcg
gaagaggaagaagattgccacactgcatggggaattaaattcctcttcgaagataaggga
aaagacgtcaaatacactcactgtgagcttgatatgtcctttttattgggtataagttgt
ggtatcattccctttgccaatcatgatcatgctaggagggttttataccaatccgagaag
cattctggacaagctatcggattttccagcacaaacccaaatattagagtcgataccttg
tcccaccaaatgtactaccctcaaaagccgcttttccgatctgctatttctgattctctc
ggaaattcattaggcaatcaaatacttcccaaggcagaattttttaatggccaaaatggc
attgtggctgtgaacgtgcacctagggtacaatcaagaagattcgatcgttatgaatcgt
gcttccttggaacgaggcatgtttagaactgagcatatcaggagctacaaggctgaagtt
gacaacaatgaatcatctgataagaggcgtaagtttgatgacactgttagttttgggaaa
atccagagcaaaataggacgtgttgacagtcttgatgatgacggatttccatttattgga
gcaaacttgcatagtggagatattattattggcaggtgtgcagaatctggggctgatcat
agtgtcaaactgaagcatacagaacgaggaatggtgcagaaagtcgtcttgtcagctaat
gacgatggaaagaattttgctgttgtatcgcttagacaggttcgttcaccttgtcttggt
gacaagttttcatccatgcatgggcaaaagggtgtcctgggttttctggagtctcaggag
aattttccgttcacaaaacaagggatagtgccggatattgttatcaatccgcatgcgttt
ccctctagacaaactcccggccaacttctggaggctgccttagggaaaggtattgcttgt
ggtggcacattgagatattcgacccctttctctactctttcagttgaagccataacagag
cagcttcacagggctggattctcgagatgggggaacgaaagggtctacaatggtagaaca
ggcgagatgatccgctcccttatattcatgggacctaccttctaccagcgtctgattcat
atggcggaagacaaagtaaagtttcgcaacacaggccctgtccatcctctgactcgtcag
ccggtggcagacaggaaacgttttggaggcatcaagtttggggagatggagcgggattgt
ttgatcgctcatggtgcttcagccaaccttcacgaacggctcttcactttgagcgactcg
tcccagatgcacgtttgcaggaggtgcaagaacttagcaaatgtgatccagagggcagtt
cccggaggcaagaagatccgaggtccatactgtagattctgcgaaactctagacgatatt
gtgaaggtgagtgttccgtatggtgcaaaattattgtgtcaggaactgtttagcatgggt
atttctcttagatttgagactgatctttgttaa

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