Amaranthus tricolor (tampala): 130802900
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Entry
130802900 CDS
T09367
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130802900
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130802900
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130802900
Protein phosphatases and associated proteins [BR:
atri01009
]
HAD phosphatases
Fcp/Scp phosphatases
130802900
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130802900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
ALOG_dom
Motif
Other DBs
NCBI-GeneID:
130802900
NCBI-ProteinID:
XP_057522993
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Position
16:complement(9720341..9728152)
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AA seq
458 aa
AA seq
DB search
MSVDNDSPVNSSSSDDFAALLDAELDSGSSDKSPDQGSSDDDEDIVAEADARKKRRTILE
MDNGVQLDDSNSSGLDASALDKPIKESCTHPGFLKDMCIGCGKRMDDGARVGAGVAFGYI
HKDLRLGSDEISRLRDADVRTLLRHKKLYLVLDLDHTLLNSTRLDDLSSEEDYLMSQTDS
FEDISKGSLFRLDMIRMMTKLRPFIRTFLQEASNMFEMYIYTMGERHYALEMANLLDPGG
LYFNSRVISQADCTQRHQKGLDVVLGVESAVLILDDTEAVWQKHKDNLILMERYHYFSSS
CRQFGFHCKSLSELKSDENEADGSLATVLGVLKKIHGLFFDPEHENDFAARDVRQVLKQI
RKEILKGCKIAFSRVFPMKFQAAHHHLWKMAEQLGATCSVEVDSSVTHIVSTDAGTEKSR
WAFQNGKFLVHPKWLEASNYLWIRQPEEQFPVQQTKSK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgacaatgattccccagtaaattcatcgagtagcgatgattttgcggcacta
cttgatgctgagttagattctgggtcttctgataaatccccagatcaaggttcaagtgat
gatgatgaagatattgttgctgaagcagatgcaaggaagaaaagacgaacgatattggaa
atggacaatggtgtgcagcttgatgattcaaattccagtggactcgatgcttctgcttta
gacaaacctataaaggagtcatgtacacatcctggtttcttgaaagatatgtgtattggc
tgtggaaagcgaatggacgatggagctagagttggagctggtgttgcatttggatacatc
cataaggacttgaggttgggtagtgatgagatctctcggttacgcgatgctgatgtgagg
actttgctacgccataagaaactctatttagtccttgatttggatcatacattgcttaac
tcaactcgactggatgatttgagttcagaagaagactatttaatgagtcagacagactct
tttgaagatatttcaaagggaagtttatttcgactggatatgattcgcatgatgaccaag
ctaaggccattcattcgaacattcctgcaagaagcaagtaacatgtttgaaatgtacatt
tataccatgggagaacgccattatgccttagaaatggcgaatcttcttgatcctggaggt
ttgtattttaattcaagagtaatttcccaagctgattgcactcaaagacaccaaaagggt
ctagatgtggtactgggtgtagagagtgctgttttgatacttgatgacacagaagccgtt
tggcaaaagcacaaagacaatttgatattgatggaaagatatcactacttctcttctagt
tgtcggcagtttggttttcattgcaagtctttatctgagttgaaaagtgatgagaatgag
gcagatggatcacttgcaacagttcttggagttcttaagaagattcacggcttgttcttt
gatcctgagcatgaaaatgactttgctgctagagacgtaagacaggtgctcaaacaaata
cgaaaggaaatcctcaaaggttgcaagatcgcctttagtcgtgtttttccaatgaaattc
caagccgctcatcatcacctttggaagatggctgaacagcttggagcaacgtgctcagtt
gaagtcgactcttctgttacacatattgtgtcgacagatgcaggaaccgagaaatcacgt
tgggcatttcagaatggaaaatttttagtccatcccaagtggcttgaagcttcgaactat
ctatggattagacaaccagaagagcagtttcctgttcaacaaacgaagagcaaataa
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