Amaranthus tricolor (tampala): 130802920
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Entry
130802920 CDS
T09367
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130802920
04121 Ubiquitin system [BR:
atri04121
]
130802920
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130802920
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130802920
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130802920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-RING-like
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130802920
NCBI-ProteinID:
XP_057523020
LinkDB
All DBs
Position
16
Genome browser
AA seq
449 aa
AA seq
DB search
MASAEAITTPTSSSYWCYSCNRFVRVSTNSISLSSNSSISCPDCHGGFVEEFDSPSPSLS
GQPPPLQLPQLFSSPLSDSRRRQFPATAMFMVGNPNSTSNSNSNPNSNSNSLSSSPRLRR
SRRNGGDRSPFNPVIVLRAPPEPENSGGGGGAGGSYELYYDDGGGTGLRPLPASVSEFLL
GSGFDRLLDQLAQIEINGIGRNEQPPASKAAIESMPTIEIVDDHIECEVYCAVCKEAFEL
GSEAREMPCKHIYHHDCILPWLSLRNSCPVCRHELPSDNNNNNNNSGESPELNPVDYSRR
NNNNHNGNTRHGGGLVEGNEDETVGLTIWRLPGGGFAVGRFSGGRRGERELPVVYTEMDG
GFNQGGIPRRISWSSRGGRSRERGGIRRAIRSLFSCFGGSRHHQALEDSSGSSTDSRVNS
QRSRATSFFSASSRSRSRGFDMGSRIRRW
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggaagcaattacaacaccaacatcatcttcatattggtgttacagttgc
aatcgatttgttagagtttcaacaaattcgatttctctttcttcaaattcttcaatttct
tgcccagattgccatggtggtttcgtcgaagaattcgattccccttctccttcactttca
ggacaacctccacctttacaattaccacaactcttttcttctcctctttccgattctaga
cgacgtcagtttcctgccacagctatgttcatggtcggtaaccctaattcaacgtcaaat
tcaaactcaaatccgaattctaattcaaattcgctttcgtcgagccctagacttcgtcgt
agtcgaagaaatggtggtgacaggtcaccttttaacccggttatcgtattacgggcccca
cccgaacctgaaaatagtggtggtggagggggagcaggagggagctatgagttgtattac
gatgatggaggaggtacaggtttaagaccattacctgctagtgtatctgagttcttgctc
gggtcgggttttgatcggctattagatcaattagcccaaattgaaatcaacggaattgga
aggaatgaacagccgccggcatcaaaggcggcaattgaatcgatgccgactatcgagata
gttgatgatcatattgaatgtgaggtttattgtgctgtttgtaaagaagcttttgagcta
gggtctgaagcaagagaaatgccctgtaagcatatttatcaccatgattgtatattacct
tggttatctttaaggaattcttgtcctgtttgtaggcatgaattgccttctgataataat
aataataataacaactcgggtgaatcacccgagttgaatccagttgattatagtaggcgt
aacaacaataatcataatggtaatactagacatggtggtggtttggttgagggtaatgag
gatgagactgttgggttgactatatggagattgcctggtggtgggtttgcagttgggagg
ttttcaggtgggagaagaggggagagagaattacctgttgtttatactgaaatggatggt
gggtttaatcaaggaggtattcctaggaggatttcatggagctctcgtggtgggagatcg
agggaaaggggagggattcgaagggctataaggagtttgttctcttgttttggtgggagt
aggcatcatcaagcattggaggattcgagtggttctagtaccgattcaagggttaatagt
cagaggagtcgagcaacatcgtttttctctgcttcttcgagatcgagaagcaggggtttt
gatatggggagtaggataagaagatggtaa
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