Amaranthus tricolor (tampala): 130803012
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Entry
130803012 CDS
T09367
Name
(RefSeq) coronatine-insensitive protein 1
KO
K13463
coronatine-insensitive protein 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130803012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130803012
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130803012
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
LRR_FBXL18
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
130803012
NCBI-ProteinID:
XP_057523139
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Position
16:complement(4031899..4037977)
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AA seq
581 aa
AA seq
DB search
MVGNHPRTMSDEILECILPYIQDPRDRSSISSVCRRWYELDRFTRRHVTIALCYTTTPQR
LHDRFPNIESLKLKGKPRAAMFNLIPEDWGGYVRPWVEMLASFPRLNSLHFRRMIVTDAD
LEIIANTQGRLLQSLKLDKCSGFSTDGLLHITRSCKNLKTLFLEDSSITDNSGEWFQQLA
QHNKVLETLNFYMTFIEQIRVEDLELLARNCPLVSVKIGDTDLVNLGKFFRLTTRLQEFS
GGSYNEDLDQYCGIVFPPQLTSLGPMYLTDSHLPVLFPVANSLLRLDLVYASLNCVGHCE
LIRRCKNLEVLETTNIIGDQGLEVVSSTCKKLKRLRIERGADELALGVDPGVVTQTGLIA
VAQGCPDLEYLAVYVTDITNEALEYVGANLKNLNDFRLVLLDREEQITDLPLDNGVRALL
QGCQKMQRFALYVRHGGLTNIGLKYIGQYSRNVRWMLLGLVGETDEGLEELSKGCPNLEK
LEMRACCFSESALANAAKKLTSLRYMWVQGYRASQIADILQMARPYWNIEVIPGDQYDYN
ENNDGQPIRIDHPSHIIAYYSLAGQRADNPPSVYTLAVPEQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtaatcatccaagaaccatgtctgatgaaattctcgaatgtatattgccctat
attcaagatcctagagatagatcttccatttcatctgtttgtagacgatggtatgaatta
gatcgattcacaagacggcatgtaaccattgccctttgttatactactacacctcaaaga
ctccatgatcgatttccaaacattgagtctttgaaacttaaagggaaacctagagctgct
atgtttaatttgattcctgaagattggggtgggtatgtaagaccttgggttgaaatgtta
gcgagttttcctcgtcttaattcgcttcattttcgacgaatgattgttacagatgcagat
ctggagattattgctaatactcaaggtcgtttgttacaatctctgaagctggataagtgc
tcgggtttttctacggatggtcttttgcatattactcgctcttgcaagaatctgaaaact
ctgtttttggaagatagcagtattactgataatagtggtgaatggtttcagcagctggca
caacacaacaaggttcttgaaactttgaatttctatatgactttcatagagcaaatcaga
gttgaagatcttgaacttcttgccagaaattgtcctctagtctctgtgaaaattggtgac
accgatcttgtcaatcttggaaagttctttcgtttgacaacaagattgcaagagttttcc
gggggttcttataacgaagacttggatcaatattgtggtatcgtatttccacctcaattg
acgtccttgggacccatgtacttaacggatagtcatttgccagtactatttccggttgcc
aactcgttactgaggttggatctagtttatgcttcacttaattgtgtgggacactgcgaa
ctcatacgtagatgcaaaaatttagaagttttggagacaacaaatattattggagatcag
ggattggaggttgtatcttcgacgtgcaagaaattgaagagacttcgtatagaacgaggg
gcagatgaactagctttaggcgtcgatccaggtgtggttacgcagactggcttaattgct
gtagcacaaggctgtccggacttagaataccttgctgtttatgtgaccgatataacaaat
gaagccttggaatatgtaggagctaacttgaaaaatctaaatgatttccgacttgtgtta
cttgacagagaagaacaaatcaccgatttgccactcgataatggagttagagctctttta
caaggttgtcagaaaatgcaacgatttgccttgtatgtcagacatggagggttgacgaac
atcggcctcaaatacatcggccagtacagtcgcaacgtaaggtggatgcttttaggtctt
gtgggagaaaccgatgaaggacttgaagaactttccaagggttgccccaaccttgaaaaa
ctcgagatgagggcttgttgcttcagcgaaagtgcactggcgaatgcagctaagaaactg
acatcccttcgatacatgtgggtccaaggataccgagcatcgcaaattgccgatatccta
caaatggctcgaccatattggaatatcgaggtgattcctggtgaccaatatgattataac
gaaaataatgatggccagcctattaggattgatcatccatcccacatcattgcgtattac
tcccttgccggtcagagagcagataatccaccgagcgtttacactttagccgtgccagag
caatag
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