Amaranthus tricolor (tampala): 130803063
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Entry
130803063 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130803063 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130803063
Membrane trafficking [BR:
atri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130803063
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130803063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_IFT140_1st
WD40
Beta-prop_VPS8
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
130803063
NCBI-ProteinID:
XP_057523205
LinkDB
All DBs
Position
16:4644074..4663264
Genome browser
AA seq
1092 aa
AA seq
DB search
MFSKFFHKNSSDNQHKALIDLNPHVIAHYGIPSAASRLAYDSIQQLLAIGTLDGRIKVIG
SHNIEGLLTSPKEIPFKNLEFLENQGFLIAVSNENDIQVWDLAHRCIATVLQWDSNITAF
CVIEGTNYMYLGDDCGLVSVLKYDVEERKILRQQYSISAVAVSEAAEIPLHNDQAVVGVL
TQPYTGASRLLLAFDNGVIVLWDITKDQLVHVRGWNNHQVNDGHGDSSEISRINEGKNQL
GHEQTDKEIISLCWASSDGYILAVGYVDGDIVFWNLSDVTTSKDHKAGAPAKVTKLQLSS
AERRFPVIVLHWSAKGVHDYPGGQLFVYGGDEIGSAEVLTILSLEWSPKRDALKNVIRAN
VTLQGSFADMILLHSFSVVEDMDTTSLFLLTSPGQLQYYDSPSLSQLISHQDKSCTIPLA
YSSIVPTTEPYLTIGRFISIHGNIELLAALSEMASAVELQETNLSCEKSSKWPLNGGVPC
HLSLLGERKVERLYIAGYQDGSVRVWDATYPILSPIYLLDPEVKGITSAGVNGSVSAVDF
SSETLKIAVGNDCGAVHVHNLTRNINETSSHVVSGIQSEVSNFDQENGSHHSAVFTLSTF
PVCTLRYTNLGARLAVGYENGQVAMLNISSSSVLFFIDTLSSPSSHVVSFSPAISSEIYG
LTSIFDQSTLHEKTRIKEIIFALTKDLHISVVESSNGNVIGSVSKDHKESTAISMHILEG
TKCITEVSGGKQEHSEEAKASEGTFDSVDRYSDLLPSCKDLQILICCTDVLLLYFLKSVI
KGHADSICEVHLPNTSCWTTVFKKDEEEDVLLVFYQTGSMEIRSLQNLEVLGEVSLLSIL
RWNFRTNMDKTMACTEKGQITLLNGCEFVILSLLAHENDFRIPQSLPCLYDEALAAALDL
SSPNDKKDKETSSGIFGGIIKGLRASTEDQNTNLKESPKFLRSALDKVFAGLKLDSSIAV
KDSEKAVELNIDDLEIDGPLNVSPIVHKSKHENIDKSTERKKLFEGGTSETKPKQRTIEE
IKAKYRKAGDTSSSTASAASAASEARNKLLERKEKLERIDKNSEELRNNAENFASMAKEL
AKKMENRKWWQL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgaaattcttccataagaattcatctgataaccagcataaggctctgatcgac
ttaaacccacatgtcattgctcactatggaattccttcggcagcttctcgtcttgcttat
gattcaattcagcagcttttagcaattgggacgttagatggaaggatcaaagttatcggc
agtcataatatcgaaggcctgttgacatctcccaaggaaatacctttcaaaaacttagag
ttcctcgaaaatcaaggtttccttattgctgtttcaaacgaaaatgatattcaggtttgg
gatcttgcccacagatgcatagccaccgtgttgcaatgggattcaaatataactgccttt
tgtgtgatcgaaggaacaaactatatgtatctaggagatgattgtggattggtctctgtt
ctaaagtatgatgttgaagagagaaagatattgcggcagcagtatagcatatcagccgtt
gcagtttctgaggctgctgaaattccactgcataatgatcaagctgttgttggagttctt
actcagccctatacaggggcaagtagattgctgcttgcatttgataatggagttattgtt
ctttgggatatcactaaagatcagctggttcatgttagaggatggaataatcaccaagtg
aatgatgggcatggggatagttctgaaatttctcggatcaatgaaggaaaaaatcaactg
ggtcacgaacaaacggataaagaaattatctcactttgttgggcgtcttcagatggatat
attcttgctgttggctatgttgatggggatattgtgttctggaacttgtctgatgtcaca
acaagcaaagatcacaaagctggagcaccagctaaggtgaccaaacttcaattatcatca
gctgagagaaggtttcctgtgattgttttgcattggtcagcgaaaggtgtacatgattat
cctggtggtcagctcttcgtctatggtggcgatgaaattggatcagctgaagttctgacg
atcttgagtcttgaatggtcgcctaagagagatgctttgaagaatgtcattcgtgcgaat
gtcactctacaaggttcatttgcagatatgatattgcttcatagctttagtgtggtggag
gatatggataccacatcattatttttattgaccagtcctggacagctgcaatattacgac
agcccttccttgtcgcaattgatctctcatcaagataaatcttgtaccattcctctcgca
tacagtagtattgttccaacaactgaaccatacttgactattgggaggttcatttcgata
catggaaatattgagcttttggcagctttatcagagatggcttcagctgtggagttgcaa
gaaacaaatttgtcttgtgagaagagctcaaagtggccattaaacggcggagttccctgt
catctgtcacttctcggggagagaaaagttgaaagactctatatagctgggtaccaagat
ggatcagttcgagtatgggatgctacatatccgatactgtcacctatttatctattagat
ccggaggtcaaaggcatcactagtgctggtgttaacggatccgtttctgctgtggacttt
tcttctgaaacactaaagatagcagttgggaacgactgtggcgcggttcatgttcacaat
cttactagaaatatcaacgaaaccagctcacatgttgtgtctggaatccagagtgaagtc
agcaattttgatcaggaaaatggatctcaccactcagctgtgtttacattaagtacgttt
cctgtatgcaccttgagatacacaaatctcggagccagactagctgttggatatgaaaat
gggcaggttgctatgcttaatataagctcgtcaagtgtcttatttttcatagatactctt
tcaagcccaagttcccatgtggtctcattttcaccagcaatatcttcagaaatatatgga
ttgacatccatttttgatcaatccacacttcatgaaaagactcggattaaagagattata
tttgccttaacaaaggatttgcatatttcagttgtagaaagttccaacggaaatgtgatt
ggctctgtctctaaagatcataaggaatcaactgcaatttctatgcacattcttgaggga
actaagtgcatcactgaagtctctggtgggaaacaggagcacagtgaagaagctaaagca
tctgaaggaacttttgatagcgttgaccgatattctgatcttttgccaagttgtaaggac
ttgcagattttaatctgctgcaccgatgtcttattgttgtactttttgaagtccgtgatt
aaggggcatgctgattcaatctgtgaggttcatcttccaaacaccagctgttggacaacc
gttttcaagaaagacgaggaggaggatgtgctgcttgtattttatcagacaggttcaatg
gagattaggtctttgcaaaatcttgaagttttgggagaagtctctctactgtccattctg
cgatggaacttcaggaccaatatggataagacaatggcttgcacagaaaagggccagatt
actttgttgaatggatgtgaatttgtcattctgtctcttttggctcatgaaaatgatttc
aggatcccacaatctttaccgtgtttgtatgatgaggccctggcagctgctttagatcta
agctctccgaatgataagaaagataaggaaacatcttcaggaatttttggtggaataata
aaaggcttaagagcaagtacagaagatcagaatacaaatctcaaggagagtccaaaattt
ctccgatcagcattagataaagtatttgctggtcttaaattagactcttctatagccgtt
aaagattctgaaaaggcggttgagctcaacattgatgatttagaaattgatgggcctctg
aatgtctctccaatagttcacaaaagcaaacatgaaaatatagataagagcacagaaagg
aaaaagttgtttgaaggtggaacctctgaaacaaagccaaaacagagaacaatcgaagaa
atcaaggccaagtacagaaaggctggggatacgtcctcgtctacagcgtctgctgcctct
gcggcatctgaagcaagaaacaagcttttggaaaggaaagaaaagcttgagagaattgac
aagaacagtgaagagctaagaaataatgctgaaaactttgcctcaatggccaaagaactg
gcaaagaagatggaaaatcgcaagtggtggcagttataa
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