Amaranthus tricolor (tampala): 130803087
Help
Entry
130803087 CDS
T09367
Name
(RefSeq) sister chromatid cohesion 1 protein 1
KO
K06670
cohesin complex subunit SCC1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130803087
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130803087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
130803087
NCBI-ProteinID:
XP_057523238
LinkDB
All DBs
Position
16:complement(5126820..5132740)
Genome browser
AA seq
639 aa
AA seq
DB search
MFYSHQLLARKAPLGQIWMAATMHAKMNRRKLDQINLIRICEEILNPSVPMALRLSGILM
GGVVIVYERKVRLLYDDVNRLLVEINTAWKVKPAVDPTVLPKRKNKAKFESVTIPENQEV
NFGDVEPSIDYSNRYTSSATFQRTAYVAMRLDTIDDFNENFREADLNGHQHQADPANITL
NDPFDSLRAEPSFYNRYERFDIEGDEETQNNFPSQGHTEMPPPTVHSPPQEMEIEREDNM
RTFFMEDGIPEQNPVDQANSSTPKLREVWQNIQKQRPTRKKARQSPVKMDIENTMIPSNM
YQTWLQDSTDIVIKRPEIVKVVKEKSTLKLAKLLDLPPVALSCGLVGKYNDVHYPQALLD
LWMTTMQRMNDSPSATTSSPRPPERSSSSLPNGQDYRIPPEVPIGGISRGTTSERLAAEE
IRGILRNLGTGTEVPIQDFNLMSNSVGKTNPNASAPNSGASVRSMSVPSPGPGLDFLSNT
SDSYSNRLRRKRSSSQLNNVGLESLDEENQWMHEMGEQNIPEFSELLQSRFKLPRRSRQG
LTPPDQELLVETGPTQNRLPAIDEEADRMAYNISMHLKTYFEVLGAPQSESLNQLAYGMN
RKQAAQLFYQTCVLATRDILKVQQISAYGDITISRGAKM
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttctactctcaccagcttcttgctaggaaagctccgctaggtcaaatatggatggca
gctacaatgcacgccaaaatgaatcggagaaagctcgatcaaatcaacctcattcgaatt
tgtgaagaaattttgaatccatcagtaccaatggcgctcagactttctggaattcttatg
ggtggtgttgtaatcgtttatgagcgcaaagttagactcctatatgatgatgtaaatcgt
cttctggttgaaatcaacactgcatggaaggtgaaacctgctgtggaccctacagttctc
ccaaagaggaaaaataaagccaagtttgaatctgtgacaatacctgagaaccaagaagta
aattttggagatgttgagccgtcaattgactactctaacagatacaccagcagtgcaact
tttcagcgaacagcttatgttgccatgagacttgatactatagatgattttaacgagaat
ttcagggaagcagacttaaatggacaccagcatcaagcggatcctgctaatattacctta
aatgacccctttgattcacttcgtgctgaaccaagtttttataatcgttatgaacggttc
gatatcgaaggagatgaagaaacgcaaaataacttcccttctcaaggccacacagaaatg
ccgcctcctactgtacactctccacctcaagaaatggagatagagagagaagataatatg
cgaacttttttcatggaggatggcattcctgaacaaaatccagtggaccaggctaattca
tctacacctaaactcagggaggtttggcagaacatacagaagcaaaggccaacaagaaag
aaggcaaggcaatctcctgtgaagatggatatcgaaaataccatgattccgagcaatatg
taccaaacttggctccaagattcaactgacattgtgatcaaaaggccagaaattgtcaag
gtagtcaaagagaaatcaactttgaagttagccaaactactagatttgccgccagtagca
ctatcttgtgggttagtaggaaagtacaatgatgttcattatccacaagcgctactagac
ttatggatgacaactatgcagcgtatgaatgattcaccttctgcaacaacttcttcaccc
cgtccaccagaacgatcatcatcgtcacttcccaatggacaagattatcgaattccacca
gaagttcctattggaggtattagccgtggaactacatctgagagattagccgcagaagaa
ataagaggaattctacggaatcttggaacaggaaccgaggttcctatacaagacttcaac
ctcatgtccaatagtgtgggcaaaacaaatccaaatgcttcagccccgaactctggagca
tctgttagatcaatgtcagttccaagcccaggtcctggacttgatttcttatcaaacact
tcagacagctattctaatcggttaagaaggaaaagatcttctagtcaattgaacaatgtt
ggtttggaatcactggatgaagagaaccaatggatgcatgaaatgggagaacaaaatatt
ccagaattcagtgaattacttcaatcacgctttaaattgcctagacgctctagacaaggt
ctaaccccccctgatcaagaattgctggttgaaacaggacctacacaaaatcggcttcct
gcaatagatgaggaggctgacaggatggcttacaatatctcaatgcatctgaagacatat
tttgaagttctaggtgcacctcagtcagaatcattgaaccagctagcgtatgggatgaac
agaaaacaagctgcacagcttttctatcagacctgtgttctagcaacgcgtgacatcctc
aaagtgcagcagatatcagcatatggagacattacaatttctagaggagctaagatgtga
DBGET
integrated database retrieval system
