Amaranthus tricolor (tampala): 130803429
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Entry
130803429 CDS
T09367
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130803429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130803429
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130803429
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF7769
HTH_7
AAA_16
SWI2_SNF2
HTH_Tnp_ISL3
HTH_28
Motif
Other DBs
NCBI-GeneID:
130803429
NCBI-ProteinID:
XP_057523540
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Position
2:complement(28805243..28822324)
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AA seq
909 aa
AA seq
DB search
MNLSFTLAPDGVDETGENLDDDRTLQHSLSVGISHTNGSIFTPFQPNFEFPNDGTVYQRS
TYSNFFDAMDESVNSGPTSIQTTGDGSSSENENTANSVLSTSNATNTTEKVVRVKSRKRR
DLKEDEMTQLAFELIDKETNLKLPHGYIKDVAEQFGISRWTVERVWKKVRITIQNNEKLN
LKKQYKGSKGFVRISREVGLGINHISSDVELGTDEISTKASKGIYLGVEEDTATLAEPEI
NDEDENLADIWKEMEYAMESCREIAENDTSDGDEREDDDDCDHSCVLKDDIGYVCRVCGL
VQKEIQDIYEFIYPKQTRFKPSYQKETQNNKDDSNPADALPDWYKLLRMNLDVTEVLAHS
DHIKQMKPHQIEGFTFLLKNVVTENPHGCILAHAPGSGKTFMIICFLQSYLAKYPSARPL
VILPKGIVGTWKKEFQRWKLNDIPLYDFYSMKATNRPQQLNVLKQWAEQKSILFIGYQQF
SSIVTCDTTSKEKAACREILVRAPTVLILDEGHTPRNKNSDMLHSLTQVQTPRKVVLSGT
LYQNHVREVFNILNLVQPRFLKLERNCAIVRRILSKVEISGVRKQLTAGAGDAAFYDLVE
NTLINDENEQRKVGIIKDLREMTSHVLHYYKGDSFDELPGLIDFTVVLNLSPKQRAEVDE
MKKLKESKFKCSFLGMAIYVHPMLKGLSVGSDESKHRSDEKMDQIVKKLNVTEGVKATFF
LSVLRLCEIANEKLLVFSQYLLPLKFLERLAVHVKGWTVGKEIFMITGDSTTEHREWSME
QFNSSPNSRVFFGSIKACGEGISLTGASRILMLDVHLNPSVTWQAVCRAFRPGQQKKVFT
YRLVAADSPEEEDHTTCYKKEIIAKMWFEWDDFSKKKDLELKCIDLEDCDDIFLQSPLIC
KDIKALYKR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcagtttcacacttgctcctgatggagttgatgaaacaggagaaaatcttgat
gatgatagaactcttcagcatagcttatcagtagggattagtcacactaatggcagtatc
ttcacaccttttcaaccaaatttcgagtttcctaatgatggaacggtataccaaaggagc
acatactctaatttctttgatgcaatggatgaatcagtcaattcaggcccaacatccatc
caaacaacaggagatggcagttcatcggagaatgaaaacactgcaaattcagttctaagc
acatcaaatgcaacaaacacaacagagaaagtagtgagggtaaagagtaggaaaaggagg
gatctcaaggaagatgaaatgacacagttagcatttgaattaatcgacaaagagactaat
ctcaagttaccacatggttacattaaggatgtggcagagcagtttggtatatccagatgg
acagtggaaagagtgtggaaaaaagtaaggataactatacaaaataatgaaaagttgaat
ttaaagaagcaatacaaaggaagcaaagggtttgtcagaatttccagagaggtgggattg
ggaattaatcatatctccagtgatgtggaattgggaacagatgaaatttctaccaaagcc
agtaagggaatctacttaggggttgaggaggatacagcaactttagctgaacctgaaatt
aatgatgaagatgagaatcttgccgacatatggaaggagatggaatatgcaatggaatct
tgcagggaaatcgctgagaatgatacttctgatggagatgaaagggaggatgatgatgac
tgtgaccattcttgtgtcttgaaggatgatattggttatgtttgccgtgtttgtggacta
gtgcaaaaggaaatccaagatatatatgaattcatttacccaaagcaaacaaggtttaaa
cctagttaccaaaaggaaactcagaacaataaagacgacagcaatcctgctgacgctctt
cctgattggtataagctcttgaggatgaatctagatgtgactgaagttttagcccactcg
gatcacataaaacaaatgaagcctcatcaaatagaaggtttcacatttctgctaaaaaat
gtggtaactgagaatccacatggttgtattttggcccatgcacctggctcaggaaaaacc
ttcatgatcatatgtttcttgcaaagctatcttgccaagtatccttctgcgagaccacta
gttatcctcccaaagggaatagtgggcacgtggaagaaagaatttcaaaggtggaaactt
aatgacattccactatacgatttctattcaatgaaggcgaccaatcgtccccagcagctg
aatgtcctaaagcaatgggcagagcagaaaagtattctctttatagggtatcagcagttc
tcttctattgtgacttgtgatactactagcaaagagaaggctgcctgtagagagatactg
gtgagagctccaacagttctgatattggacgagggacacactccgaggaataaaaacagt
gacatgctgcactcgcttacccaagttcagacacctcgaaaagttgtgctttcaggcacc
ctttatcagaatcatgtccgagaagtattcaacattttaaaccttgttcagcctagattt
ctcaagttagagcgtaattgtgcaattgttaggcgtattttaagcaaagttgagatttct
ggggtcagaaaacagttgacagcaggagcaggggatgcagctttttatgacttggtggag
aacacactgatcaatgatgaaaatgagcaaaggaaagttgggattattaaagatttgcgt
gagatgacaagccatgttcttcattattacaaaggggactcctttgatgagttgccggga
ttgatagactttactgtcgtcttgaatcttagccctaagcaaagggctgaagttgatgag
atgaagaaattgaaggaaagtaagttcaaatgtagctttttggggatggcaatatatgtg
catcccatgctgaaaggattgtcggtaggtagtgatgaaagcaaacatcgaagtgatgag
aaaatggatcaaatagtcaagaaactgaatgttacagaaggggtgaaagccacattcttc
ctcagtgtgttacgtttatgtgaaattgctaatgagaagttgctagttttcagtcagtat
ctgctgccattaaagttcttagagagattagcagtgcatgtgaaaggttggacagtcgga
aaggagatattcatgataacgggtgactcaactacagaacaccgtgaatggtccatggaa
cagtttaacagctcacctaattcacgggtgttttttggatcgattaaagcgtgtggggaa
ggaatatcactaactggggcatctcgtatattgatgcttgatgttcatttgaatccttct
gtcacttggcaagctgtatgccgtgcatttaggcctggacaacagaaaaaagtttttact
tataggttggttgcagctgattcacctgaagaggaggaccacacaacttgctataaaaaa
gagataattgctaaaatgtggtttgaatgggatgatttttccaagaagaaggatttagaa
ctcaagtgcatagatttggaggattgtgatgatatttttttgcagagcccattgatttgt
aaagacattaaagctttgtacaaaaggtaa
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