Amaranthus tricolor (tampala): 130803558
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Entry
130803558 CDS
T09367
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130803558
04121 Ubiquitin system [BR:
atri04121
]
130803558
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130803558
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130803558
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130803558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130803558
NCBI-ProteinID:
XP_057523706
LinkDB
All DBs
Position
17
Genome browser
AA seq
433 aa
AA seq
DB search
MASTAAINTSSYSSYWCYICNRFVRVSTNQFSLSSDSISCPDCHGGFLEEFDSAPTLFPP
PQLSSSPLSDSTRRRFPAGAMYMVGNPTNSNPIPNSNSFSSSPRFRRSRRNGGDRSPFNP
VIVLRTPSEPENGVHGAGGSYELYYDDGGGSGLRPLPASVSEFLLGSGFDRLLDQLAQIE
INGIGRNEQPPASKAAIESMPTIAIVDEHVECEVYCAVCKEAFELGSEAREMPCKHIYHH
DCILPWLSLRNSCPVCRHELPSDNNNNNSSGSPELNPVDNNGRSNNNYSVNNGNGGGLVE
GNEDETVGLTIWRLPGGGFAVGRFSGGRRGERELPVVYTEMDGGFNQGGIPRRISWGSRG
SRSREIGGIRRAVRNLLSCFGGNRNHHQALEDSTSSSTDSRVTSQRSRATSFFSASSRSR
SRGFDMGSSIRRW
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacagcagctattaatacatcttcatattcatcctattggtgttacatatgt
aatcgatttgttagggtttcaacaaatcaattttctctttcttctgattcaatctcttgc
cctgattgtcatggtggttttcttgaagaattcgattctgctccgactttatttccacca
ccacaactctcttcttctcctctttctgactctacacggcgtcgttttcccgccggagct
atgtacatggttggaaaccctactaattctaatccaattccgaattccaattcgttctct
tctagccctagatttcgccgtagccgaagaaatggaggtgatcgttcaccgtttaatcca
gtaatcgtattgcggaccccatccgaacctgaaaatggcgttcacggagcaggagggagt
tatgagctgtattatgatgatggaggaggttcgggtttgagaccattacccgccagtgtt
tccgagtttctactcgggtcgggttttgatcgattattggaccaattggcgcagattgag
ataaatggtataggtaggaacgaacagccaccagcgtcgaaagcagctatcgaatcgatg
ccgacaattgcaatagttgatgaacatgttgaatgtgaagtgtattgtgctgtttgtaaa
gaagcatttgaattgggctcagaagcaagagagatgccttgtaagcatatttatcatcat
gattgtattttaccttggttgtctttaagaaattcttgccctgtatgtaggcatgagttg
ccttctgataataataataataattccagtggttcacccgaattaaacccggttgataat
aatgggcgtagcaataataattatagtgttaataatggaaatggtggtggtttagttgag
ggtaatgaggatgaaacagttgggttaacaatttggagactaccaggaggtgggtttgca
gttgggagattttctggggggagaagaggggaaagggaattaccagttgtttatacagaa
atggatggtgggtttaatcaaggaggtattccaaggaggatttcgtggggttctagaggt
tcaagatcaagggaaattggaggaattcgaagggctgtgaggaatttgctctcatgtttt
ggtgggaatagaaatcaccatcaagcattggaggattcgactagttcgagtactgattcg
agggttacgagtcaaaggagtcgagcaacatcgttctttagcgcttcttcgagatcgaga
agcaggggtttcgatatgggaagtagtataagaagatggtga
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