Amaranthus tricolor (tampala): 130803849
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Entry
130803849 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase makorin
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130803849
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130803849
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130803849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_DUS3L
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-CCCH_RBM22
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130803849
NCBI-ProteinID:
XP_057524034
LinkDB
All DBs
Position
17:20388077..20398603
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AA seq
349 aa
AA seq
DB search
MVLCKFFKHGACLKGEHCEYAHDWNAPANNICTFYQRGVCAYGSRCRYDHLKISKVQSSS
SSSSINFFEAKTPGVTISGMAPVSSVQPELSPVSRECLPSSKAAWNQQPENPGYVEDDFV
PHPRSDRLADQIICSFAAAGTCPRGDKCPHIHGDLCPTCGKHCLHPYRLKEREEHSQTCE
KMQKHLEALKQSQEIECSVCLERVLTKPVGERKFGLLSECDHPFCISCIRGWRNSSPSSG
MDVNSTLRACPICRKLSYFVIPSVIWYFSNEEKEEIVESYKAKLKSIDCKYFEFGNGSCP
FGTSCFYKHSYRDGSVEEVVLRHLGAADGETVIAKNIRLADFLRNLHIS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggttctctgcaagttttttaagcatggagcatgtttaaaaggggagcattgtgaatac
gcacatgattggaatgcccctgcaaataatatatgcactttttatcaaagaggagtctgt
gcttatggaagtcgttgcagatacgaccatcttaaaatttcaaaggtccaatcttctagc
tcctcgtcatccattaatttctttgaagcaaagactcctggggtaactatcagtgggatg
gctccagtctctagtgttcagccagaactgtcaccagttagcagagagtgccttccttcc
agtaaagcagcttggaatcaacagcctgagaatcctggttatgttgaagatgattttgtt
ccccatcctaggagtgatcgactggctgatcaaattatatgttcatttgctgctgctgga
acctgtcccagaggggataagtgtcctcatattcatggtgacttgtgtccaacatgtgga
aaacactgcctacacccttataggcttaaagagagagaggaacattcacaaacttgtgag
aaaatgcaaaagcaccttgaagcactgaaacaaagtcaagagatagaatgcagtgtgtgt
ctagaacgtgtccttacaaagcctgttggtgaacggaagtttggtttactgtcagaatgt
gaccatccattttgtataagttgcatcaggggttggcgtaacagctcaccatcctctgga
atggatgttaattctacattgagggcctgccctatatgtcgcaaactttcatactttgtc
attccaagtgtgatttggtatttttctaatgaggagaaggaggaaattgttgagagttac
aaggccaaacttaagtccatcgattgcaagtactttgaatttggaaatggatcgtgccca
ttcggaactagttgtttttacaagcattcatatcgtgatggcagtgttgaggaagtcgtg
ctacgtcatcttggggctgccgatggcgaaactgtaatagcaaaaaatattaggcttgca
gacttcctcagaaatttgcatataagctga
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