Amaranthus tricolor (tampala): 130803857
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Entry
130803857 CDS
T09367
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
atri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130803857
03460 Fanconi anemia pathway
130803857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130803857
03036 Chromosome and associated proteins [BR:
atri03036
]
130803857
03400 DNA repair and recombination proteins [BR:
atri03400
]
130803857
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130803857
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130803857
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130803857
FA (Fanconi anemia) pathway
Downstream FA components
130803857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
130803857
NCBI-ProteinID:
XP_057524052
LinkDB
All DBs
Position
17:complement(6113208..6123714)
Genome browser
AA seq
1106 aa
AA seq
DB search
MVKTWQLFFDAGDEPRWEISPLPAPSQHHNQLHSSPPPPNLPSFHDVLLQGCSKILGCCE
KRNVEGFDTPMFRTGSGSSVVLKKSSIAKASSVLGDDFFADFDTGKSSCKGNDFSSPNSM
FQTGSGKRVNVSSAGLLRAKTLLGVHEINDDCTFQSIQPPKKKLCRVPTVSHEKGTENNT
FCSKLPFHLKNNSSEIDFVDKDIGKLIRPEFSDSTMKPSAIKFQTAGGRLISVSKDALQR
ARNLLGDPEMDSLQNDGGDGASMFSFISHNNTDGGAFNKENNTGSSHQCKQNPKIFVSPM
KLSSHKKPEGKSETLISGTNLRKFDAEASISHSNDKPSLSYLNPFQEKLDVFDATAQNSM
VNSPGPSSHFHKSSKPSGLPLTDITNTTAIASGSKKGTTNDIKRHGRRSYVSPFKTPRSS
KFITSLNCNQFLVPDGLSGRESEAPCPRKKLSTHYPFRHSRLYIKDFFKVPPPYTKELEH
LSAEVRQLNPQNSERYSFCDGSQSIGVENFYHMLVQSGASLQYASKEWVANHYKWIVWKL
ASYERCYSPKFLKKFLTVLNVFEELKYRYEREVNHGHRSAIKKILEGDALPSSTLVLCVS
KIENPNPSLEGKSSISTIELTDGWYSIRAQLDHLLSKQLAGGKLFVGQKLQICRAGLNGW
DGPVSPLKALPTVSLVMHMNGTYRVSWDERLGFCKCPCRSACAPLAFRCIKDGGGIVPCT
IVGITRIYPVLYKERLRNGASIVRSEKLEASFAQLHNQRRSNIIEGITSDFQKDSIGSSI
EDDYDSEGAKILKMLESAAEPELLMAEMSPEQLALFSKYQAKVEEKRKADLQRLIVKALE
DASLNARDVTQFMRVRVVGLKNKGQREGEVLRKGLITIWNPTEQQKLELVEGEAYAISGL
TPLHADLDTLYLHDRGRNNKWKKLTLKERELFGPFFDPPKPVLLSRIEEVSSEFDTAVLV
LHVGPELLFGQHKKQWVFVTDGSVCELQTEESEVSLLAITFSTTCTGDDSISPFNFNLVG
NIVGFRDLTKRDKDHGNCMWVAEATENSTYYLNYDHPSCSHLKDSFERVKRWKQSASVTI
EKLRTKVFHILDGPAPKARTLRLLSD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaacttggcaactattttttgacgccggagatgaaccccggtgggaaatctct
cctcttccggcaccttctcaacaccataatcaactccactcctctcctcctcctcctaat
ctcccttcgttccacgatgttttacttcaaggatgttcgaagattcttggatgttgcgag
aagcgtaatgttgaagggtttgatactcccatgtttcgaactggatcagggagctctgtt
gttttgaagaaatcatctattgctaaagcgtcttctgttcttggtgatgattttttcgcc
gattttgatactggaaaatcaagctgtaaaggaaatgattttagttctccaaattccatg
tttcaaacgggttcagggaagagagtaaatgtatcatcagctggacttcttagagctaaa
actttgctgggtgtacatgaaattaacgatgattgcaccttccaaagcattcagcctcca
aagaagaaattatgtcgagtgccgacagtctctcatgaaaaagggactgagaataataca
ttctgctcaaagttgccttttcatctgaagaataattcatcagaaattgattttgttgat
aaagatattggtaaacttatacgaccagagttttctgattccactatgaaaccatctgca
attaagttccaaactgctggtggcaggttaatatcagtttctaaagatgctttacagcgt
gccagaaaccttcttggtgatccagagatggacagtcttcaaaatgacggtggtgatggt
gcttccatgttttcatttatcagtcacaataatactgatgggggtgcttttaacaaggag
aacaacactggttcttcccatcaatgtaaacaaaacccaaagatctttgtatcaccaatg
aaattgtcttctcacaaaaaaccagaaggaaaatccgagaccttgatctcaggaaccaac
ttaaggaaatttgatgctgaggcaagcattagccactcaaatgacaaaccatctttatcc
tatctgaaccctttccaagaaaagctcgatgtttttgatgccacagctcaaaactctatg
gtgaacagtcctggtcctagttcacattttcataaatcttcaaaaccatctggcctgcct
ttaactgatattacaaacactacagcaattgcctctggcagtaagaaaggaacaaccaat
gatataaagagacacgggagaagaagttatgtttcaccttttaaaacaccaaggagttcc
aagttcatcacatcattgaactgtaaccagttcttagttcctgatggattgtctggtagg
gaaagtgaggctccatgtccccggaagaagttgtctacccattatccatttcggcattca
aggttatatatcaaagatttctttaaagtgccaccgccctacacaaaggagttggagcat
ctttctgcagaagtgcgtcaattgaatcctcaaaattcagagagatactcattttgtgat
ggatctcagtcaattggtgttgaaaatttctaccatatgttggttcagtctggagcttca
ttgcaatatgcatcaaaagagtgggttgcaaatcactacaagtggattgtgtggaaactt
gcaagctatgagagatgttattcacctaaatttttgaagaaatttcttacggttttgaat
gtgtttgaggagttaaaatatagatatgaacgtgaagttaatcatggtcatcgttctgca
attaagaaaattctagaaggagatgcattgccttcttctacactggtgctatgcgtttca
aagatagaaaatccaaatccaagtttggaaggaaagagtagcatttccactatagagctt
actgatgggtggtactcaatacgtgcacagttggatcacttgctgtcaaagcagcttgca
ggtggaaaattattcgtgggacaaaaactacagatatgtagagcagggttaaatggctgg
gatggacctgtttcacctctcaaggcattgcctactgttagtttagtgatgcatatgaat
ggaacatacagagttagctgggatgaacgtttgggattctgtaagtgtccatgtagaagt
gcatgtgcacctttggcatttaggtgtatcaaggatggtggaggtatagtcccttgtact
attgtcggaatcacaaggatttatcctgttctttataaagaaaggttgaggaatggagca
tctattgtaaggtctgaaaagttggaggcttcttttgctcagctacataatcaaaggcgc
tctaacatcatagaaggtattacatcagactttcagaaagattcaatcggttcttccatt
gaggatgactatgatagtgaaggggcaaagattctaaagatgctggaaagtgctgccgaa
ccagaactgttgatggctgagatgagtcccgagcaactagcactattctctaaataccaa
gctaaagttgaggaaaaaaggaaggccgacttgcaaagattgattgtgaaagcccttgaa
gatgcaagcttaaacgcaagagatgtaacccaatttatgcgagtgagggtcgttggacta
aaaaataaaggacagcgcgaaggggaagtcctaaggaagggtttaattacaatttggaat
cctaccgaacaacagaagcttgaactggtagagggggaggcttatgctatttcaggcctt
acgccgttgcatgctgatttagatacactttatctacatgatagaggacggaacaataaa
tggaagaaattaactttgaaagagagggaactatttgggcccttcttcgatcctcccaag
ccggtattgttatctagaatagaggaagtctccagtgaatttgatactgctgtgttggtc
ttacacgttggaccagagctcttatttggtcagcacaagaagcaatgggtgtttgttacc
gatggatctgtctgtgagttacaaacagaagaatcggaagtctcgttgctggccattacc
ttttctactacttgcacaggcgatgattcaatttctccatttaattttaacctcgttggg
aacatagttggctttcgtgatctcacaaagagagacaaggatcacgggaattgtatgtgg
gtagcagaagctacagaaaattcaacatattacctaaactatgatcatccttcttgctca
catcttaaagattcatttgaacgggtcaagagatggaagcagagtgctagcgtgacaatt
gaaaagctccggacgaaggttttccatatacttgatggtcctgctcctaaggctagaacg
ttgaggctgttgtctgattaa
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