Amaranthus tricolor (tampala): 130803903
Help
Entry
130803903 CDS
T09367
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130803903
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130803903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
130803903
NCBI-ProteinID:
XP_057524115
LinkDB
All DBs
Position
17:19526074..19531132
Genome browser
AA seq
464 aa
AA seq
DB search
MARKSHLLIFCFTILFSSIFPICHSSYFLKEHEIRSQNKYYSPSNDIEESYNDDLDPQEL
ANYDKVIIERIKNSHQAQSKALISSLSSSKIVNVEHFVRSRKIKDDTKAFNEAWKEVCSM
KNGGVFLVPRNKRYIVKPINFTGPCHSRLITIKIEGTIEASSNMSDYYDRYHWLLFQNLR
NFKVEGKGTIDGRGQIWWQNSCKVNKTKPCLHAPTALIFLECKNFIVDGIHIRNPQQMHI
SFQYSSDVRASNLFLKAPGNSPNTDGFNINATRNIHVTKSSVSTGDDCVSIVNESKDVHV
SDLICGPGHGISIGSLGKNHSKPDHVSNVLINHAKISGTTNGARIKTWQGGRGYAKKIVF
QNIELHNVSNPIIIDQYYCDQKTPCPEQKEAVRVSNIVYKNIRGTSFTEPAINFNCSETH
HCRSILMQNINILKEEVKEPATADCENIEIFYRSMVSPKCFQAS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaaatctcatcttctcatattttgttttaccattttattttcttcaattttc
ccaatttgtcactcaagctattttttaaaggaacatgaaattaggagtcaaaataaatat
tattctcctagtaatgatattgaagaaagttataatgatgatcttgatccacaagaatta
gccaactatgataaggtgatcatagaacgcattaagaattcacatcaagctcaatcaaaa
gcccttatctcttcactttcatcttcaaagattgtcaatgttgaacattttgtaagatca
agaaaaataaaagatgatactaaggcctttaatgaagcttggaaggaggtttgttcaatg
aaaaatggtggagttttcctcgtgcctagaaacaagaggtatattgtgaagccaatcaat
ttcactgggccatgtcattctcgtcttatcacaataaagatcgaaggaacaattgaagcg
tcgtcaaacatgtcagattattacgatcgatatcattggctattattccaaaatctacgg
aactttaaggttgaaggtaaaggcacaattgacggaagaggtcaaatatggtggcaaaat
tcttgtaaagtcaacaaaactaagccttgtctacacgcgcctacggctctaatctttttg
gaatgcaagaactttatagtggatggaatacatataagaaatccacaacaaatgcacata
agttttcagtattcttctgatgtaagagcttctaatttgttcttaaaagcaccaggaaat
agccctaatacagatggatttaatattaatgccacaagaaacattcatgtaactaaatcc
tctgttagtacaggtgatgattgtgtatcaatagtaaacgaatcaaaagatgtacatgta
tcagacttgatatgtggaccaggccatggaataagtattggaagcttaggcaaaaaccat
tctaagccggaccatgtctcaaatgtactaataaaccatgccaaaatttctggaaccact
aatggagcgaggataaagacatggcagggaggacgaggatacgcaaaaaaaattgtattt
caaaatatcgaattgcataatgttagcaatccaataatcatcgatcaatattattgtgat
cagaaaacaccttgtcctgagcagaaagaagcagttcgtgtaagcaacatagtatacaaa
aatataagaggaacaagttttacagaaccagccataaattttaattgtagcgaaactcat
cattgccgatcaattttgatgcaaaatataaacattctcaaggaagaagtaaaggaacca
gcaacagctgattgcgaaaatattgaaatattctatagaagcatggtttctccaaaatgc
tttcaagcatcttaa
DBGET
integrated database retrieval system
