KEGG   Amaranthus tricolor (tampala): 130803936
Entry
130803936         CDS       T09367                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52A-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130803936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atri04121]
    130803936
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     130803936
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR41 KNTC1_N Beta-prop_RIG_1st Tricorn_2nd Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_VPS8 Ge1_WD40 MIOS_WD40 Peptidase_M10_C
Other DBs
NCBI-GeneID: 130803936
NCBI-ProteinID: XP_057524153
LinkDB
Position
17:10394195..10405541
AA seq 496 aa
MEEDLNSSPPLQSSKSSFLINYPSKIARPSLNFDKIDEGPATPSKIIDRMINSHHYPSPS
RTILSDRFIPSRSSSNFSLFNVSPSHSSPKSIKQSDGVREDSNSTYTTLLRAALFGPDAG
CFFPGTPDKGPPNRNIFRFKSETKRALPSLMPFGPDDALPGVSYSPVKTPRKVPRSPYKV
LDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAQ
RGTHLAVGSNNGKVHIWDASRCKRVRTMEGHRFRVGALAWSSSVLSSGSRDKNIFLRDIR
AQDDYVSKLTGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKA
IAWSPHLHGLLASGGGTADRCIRFWNTTTNSQLGCMDTGSQVCNLAWSKNVNELVSTHGY
SQNQIIVWKYPSMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSSKSQN
TDSELGFLSLGRAQIR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggaggaagatctcaattcttctcctccattacaatcttcaaaatcatcatttcttatc
aattacccatcaaaaattgctcgtccttcccttaattttgataaaattgatgagggtccc
gctactccatctaaaatcatcgatcgtatgatcaattctcatcactatccatctccttca
agaacaattttgagtgatagatttattccttctagaagttcttctaatttttctcttttc
aatgttagtccttctcattcttctcctaagagtattaagcaatccgatggggttcgggaa
gattctaatagtacttataccacccttcttcgggccgccctttttgggcctgatgctggg
tgtttcttcccgggtacgcctgacaaaggcccacctaatcgaaatattttccggtttaaa
tccgaaacaaaacgggcattgccgtcgttgatgccttttggtcccgatgatgctcttccg
ggtgttagttatagcccggttaagactccaaggaaagtacccagatcaccgtataaggta
ttggatgccccagcattgcaggatgatttttatttgaacttggtagattggtcttcacac
aatgtacttgctgtgggattaggcaattgtgtttatttgtggaacgcttgcagtagcaag
gtgactaaattgtgtgatttggggattgatgacagtgtttgttccgttggatgggctcaa
cgagggactcatctggctgttggttcaaacaatggaaaagtccatatttgggatgcttca
cgctgtaaaagggttcgaactatggagggtcatcgattccgtgtgggtgcattggcatgg
agttcatctgtattgtcttctggtagccgagataagaatatattccttagggatatacga
gctcaggatgattatgtcagcaaattaactggacacaagtcagaggtttgtggcctcaag
tggtcatatgacaatcgtgagctagcatcaggagggaatgacaacagactatttgtgtgg
aaccaacattcaactcaacctgtattaaagtactcagagcatacagcggcggtaaaagca
attgcttggtctccccatctacacgggcttctggcgtccggaggtggtactgccgatcga
tgcatccgtttttggaatacaactactaattcacagttgggatgcatggacactggtagt
caggtttgcaatcttgcttggtcaaaaaatgtaaatgaacttgtcagcacccatggatac
tcccaaaatcaaataattgtttggaaatatcctagcatgtccaagttagcaactcttact
ggacattcatatagggttctctatcttgcagtttcaccagatggacagaccattgtaact
ggagcaggagatgaaacacttagattttggaatgtcttcccttcttcaaagtctcagaac
accgacagtgagcttggatttctttcacttggaagagctcaaatccggtga

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