Amaranthus tricolor (tampala): 130803944
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Entry
130803944 CDS
T09367
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130803944
04120 Ubiquitin mediated proteolysis
130803944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130803944
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130803944
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
U-box type E3
130803944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
130803944
NCBI-ProteinID:
XP_057524162
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All DBs
Position
17:9084702..9097042
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AA seq
1051 aa
AA seq
DB search
MASTQKPQRSPAEVEDIILRKIFLVSLLDSMESDSRIVYLELTAAEILSEGKDLRLSRDL
MERVLIDRLSNQFPNAEPTFDYLLGCYRRATEEQKKIMNMKDKNLRSEMELVAIQARKLA
VSYCRIHLGNPDMFLGGEKTVANPDDNVISWKKKESPLLPLIYSEVGGAVIDSFGGSGSN
SGGITSPPGFLDEFFREGDFDSLDPIFKCLYDNLREKVVRESALGNFQQPLRALLYLVSF
PTGVKSLVTHKWWLPPGSFLNGRAMEVASILGPFFHISALPDTSLFKSQPDVGQQCFSEA
SSRRQADLLSSFTTIKTVMNNLYDGLHEVLLCLLKKPDTRENALQFLAAVINSNSSRARL
QIDPLTCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPNYAFYSNRLDLRGLTALHAS
SEEVSAYIAEKNNGRTRDSTVTNVLDNRLLTSLEATSSGNNPSENVQKLKSNSGDGRIKY
SFICECFFMTARVLNLGLLKAFSDYKHLVQDISRSEDTLATLKAMHEQAVTRQLELDIAR
IEKEIDSYTQEKLCYDAQVLMDSELIQRALSFYRLMLVWLVGLVGDFRLPLPSPCPMEFA
CMPEHFVEDAMELLIFASRIPKALNGVILDDFMNFIIMFMASPDYIRNPYSRAKMVEVLN
CWMPRRSGSSATASLFEGHQLSLQYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELL
EYLWQVPSHRNVWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKSLEAEMSNT
DEWERRPAQERQERTRLFHQQENIIKIDMKLANEDVSLLAFTSEQITSPFLLPEMVERVA
SMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKENVFPAAISRD
GRSYNEQLFGAAADVLIRIGEDGRIVQEFVALGAKAKAAAAEAMDAEIALGDIPDEFLDP
IQYTLMKDPVILPSSKVTVDRSVILRHLLSDSTDPFNRSPLNPDMLIPDHELKAKIEEFV
RGPSSKNHNDMQLQSSKGTIQNPTPDIQFID
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacccaaaaaccccaacgatctccggctgaagttgaagacataatcctccgc
aaaatctttcttgtatctcttcttgattcaatggaatcagattctcgaattgtctatctt
gaattaacagctgctgaaattctcagcgaaggcaaagatttgcgattatctagggatttg
atggaaagggttttaattgatcgtctttccaatcaattcccaaacgccgaaccgactttt
gattatctattaggatgttatcgacgtgcaactgaagagcagaagaagattatgaatatg
aaagataagaatttgaggtctgaaatggaattagttgctatacaagcaagaaaattagca
gtttcatattgcaggattcatcttggtaaccctgatatgtttcttggtggtgaaaaaact
gttgccaatcctgatgataatgttatttcatggaaaaaaaaggaatctccattgttacct
ttgatttattccgaagttggaggtgctgttattgatagctttggagggtctgggagtaat
agcggcgggataacaagcccgcccggttttttggatgaattttttagggagggagatttt
gatagtttggacccaatttttaagtgtttgtatgataatttaagggagaaagttgtaaga
gaatctgcattgggtaattttcaacagccattaagagctttgttgtatttagttagtttc
cctactggggtaaagtctttagttactcataaatggtggttaccacccgggtctttcttg
aatggtcgtgctatggaggttgctagtattttgggtcctttctttcatattagtgctttg
ccagatacttctcttttcaagagccaacctgatgttgggcagcagtgcttctctgaagca
tcatctcgtcgtcaagctgatctattatcgtcattcactaccataaagaccgtgatgaat
aacctgtatgatggtctgcatgaagttcttctttgtcttctgaaaaaacctgacacccga
gaaaatgctttacagtttctagcagcagtgatcaatagcaattcttcgagggcacgtttg
cagattgatccattgacttgtgcaagctctggcatgtttgtcaatctcagtgctgttatg
cttaggctttgtgagccatttttagatgctaatctctctaaacgagataaaattgatccg
aactacgcattttacagcaaccgcttggatctcagagggcttactgcactgcatgcatca
tccgaagaagtttcggcatacatcgctgagaaaaataatggaagaacaagagattctact
gtaacaaatgttctagataaccgcctgttgacatctttggaagcaactagttccggcaac
aatcctagtgaaaatgtccagaaattgaagtcgaacagtggtgatggtaggattaaatac
tccttcatctgtgaatgcttctttatgactgcaagggttctgaacttgggcttattaaaa
gcattttctgactacaaacatctagttcaggacatttcaagatctgaagatactttggct
accttgaaggccatgcacgagcaagctgtcacacgtcagctggagctggatatagctcgt
attgaaaaggaaatcgattcatatacacaggaaaaattgtgctatgatgcacaagttctt
atggacagtgagcttattcaacgtgcattgtcgttttaccggttaatgctggtctggttg
gttggtctagttggtgattttagactgcctctgccttcaccttgccctatggagtttgct
tgtatgccagaacattttgtggaggatgcaatggagctgttgatttttgcttctcgtatc
cctaaagctttaaatggtgtcatattggatgacttcatgaacttcatcatcatgttcatg
gccagccctgattatatcagaaatccttattcaagagcaaaaatggtggaagtgctgaac
tgttggatgccacgtagaagtggctcttctgcaacagcaagtctatttgaaggacatcaa
ctgtctctgcaatatcttgttaggaatcttctaaagctgtatgtggacattgaatttaca
ggttctcacacacagttctatgacaaatttaatatccgtcacaacatcgcagagcttttg
gaatacctttggcaggttcctagtcatcgtaatgtctggagacagattgcaaaggaagaa
gaaaagggtgtctacctcaatttcttaaatttcctgattaatgatagcatttacctcctt
gatgaaagtcttaataagatccttgaactcaaatcgctggaagctgagatgtccaatact
gatgagtgggagcgaagacctgctcaagagaggcaggagagaactcgtctttttcatcaa
caagaaaatataataaaaattgatatgaaattggcaaatgaagatgttagtttactggct
tttacttcagaacagattacgtcgcctttccttcttccagagatggttgaaagagttgct
agcatgcttaattactttttgctgcaacttgttggccctcaaaggaaatcacttagcttg
aaggaccctgagaagtatgagttccgaccaaaacatttactgaaacagattgttaacata
tatgttcatctggcaagaggagacaaggaaaatgttttccctgctgcaatctcaagggac
ggtcgttcatacaacgaacagttgtttggtgctgcagctgacgttcttattaggatagga
gaagatggaaggatcgtacaggagtttgttgcacttggtgcaaaagctaaagctgcagct
gctgaagccatggatgcagaaattgctcttggagatatacccgatgaattcttggaccca
attcagtacacactgatgaaggacccagttatattaccttcttcaaaagtcactgttgat
cgttcagtcatcttgaggcatctactgagtgatagtactgatccgttcaaccgttccccg
cttaaccctgacatgttaattcccgatcatgaacttaaggcgaaaattgaggaatttgtc
agaggcccatcaagcaagaaccataatgatatgcagttgcaaagctcaaagggaactatc
caaaacccgacacctgatatccaattcattgattaa
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