Amaranthus tricolor (tampala): 130804033
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Entry
130804033 CDS
T09367
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130804033
03015 mRNA surveillance pathway
130804033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130804033
03036 Chromosome and associated proteins [BR:
atri03036
]
130804033
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130804033
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
130804033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
130804033
NCBI-ProteinID:
XP_057524310
LinkDB
All DBs
Position
17
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AA seq
172 aa
AA seq
DB search
MERKRSREERERVGGDHPPPPPPRSSGRPLPPPPPLSARGLPAPPPRARFQPVDREKTCP
LLLRVFTKIGGHHTQEDFSLRGKEPKDEVQIYTWMDATLRELTDLVKEVSPAARRRDAKL
SFAVVYPDKNGRMQVKKVGETFSNANKRRLDDNKALAEIYFQIGDYLDVSIE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaaaaggagcagagaggaaagagaacgtgtaggcggcgaccaccctcctcct
cctccccctagatcctccggtcgtcctcttcctcctcctccgcctctttctgctcgtggt
ctacctgctcctcctcctcgtgcccgatttcagcctgttgatcgtgaaaagacttgtccg
ttgttgcttcgagttttcaccaagattggaggccatcatacccaagaagatttttccctg
agaggcaaggagccaaaggatgaggttcaaatatatacttggatggatgctactcttcga
gagttgactgatcttgtgaaagaagtgtccccagctgccagaagacgagatgcaaagttg
tcatttgcagttgtatatccggacaaaaatggccgcatgcaagtgaagaaggtgggtgag
acattctcaaatgcaaataagagacgcttagatgacaacaaagccttggccgagatatac
ttccagattggagattacttggatgtatcgatcgaatag
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