Amaranthus tricolor (tampala): 130804102
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Entry
130804102 CDS
T09367
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03250
Viral life cycle - HIV-1
atri03272
Virion - Hepatitis viruses
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130804102
03272 Virion - Hepatitis viruses
130804102
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130804102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130804102
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130804102
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
130804102
Exosome [BR:
atri04147
]
Exosomal proteins
Proteins found in most exosomes
130804102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
GST_C_7
UQ_con
Nsp1_C
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
130804102
NCBI-ProteinID:
XP_057524412
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All DBs
Position
17:8572262..8578362
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AA seq
472 aa
AA seq
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MKLRCREAKFWNLLGRGRVYACCLTKELSSKKLIHLVETSPMAPPPHPLHVGDSNPQIRQ
FLSNVLSQRGPLSPPYTEDVKWLIRQHLISLTEVYPSLQPKTATFNHNDGRTINLLQAEG
TIPMVYQGVTYNIPVVIWLMELYPRQPPCVFVNPTRDMIIKRPHPYVTPSGIVSIPYLQK
WIYPSSNLVDLVRDLSHYFGRDPPLYSQRKSDSNSNHNLNVNANPNPSHTSLSGNSMISS
NTSYSGSIASGSVAHQSMPPRVFPPSPYVGSGRSMSPSPQRQNGTDDPNEVYKRNAISKL
VESVHSDVVALRKTREAEMEGLFSAQAILRQREEQLNKGLKEMFDEKEALEQQLQLVLTN
ADVLEGWLKDNEEKMSKMGNHNVDVDDAFEHCDTLSKQMIESSASDLAIEDVIYSLDKAV
QDGVIPFDQYLRNVRLLSREQFFHRATAAKVRAAQMQAHVASMAARSSQYVM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcgatgtagggaagctaagttttggaatttattaggaaggggtcgtgtttac
gcctgttgcttaacgaaggaactttcctccaaaaaattgatccatcttgttgaaacatct
ccaatggctcctccaccacatcccctccatgtaggcgattcaaacccccaaatccgacaa
ttcctaagcaacgttctctcacaacgaggtccattatctcccccttacactgaagatgtt
aagtggttaattcgtcaacatctcatctcccttactgaagtttacccttctcttcaacca
aaaacagctactttcaatcacaacgatggtcgtaccattaatcttcttcaagctgaaggt
acgattccgatggtttatcaaggtgttacttacaatatccctgttgttatttggcttatg
gagttataccctcgtcaacctccttgtgtttttgttaatcctactcgtgatatgatcatt
aagcgtcctcatccctatgttactccttctgggattgtttccattccttatttgcagaaa
tggatttacccttcttctaatttggttgatttagttcgtgatttgagtcattattttggt
agagatccacctctttattctcagcgcaaatctgattctaactctaatcataatcttaat
gttaatgcgaaccctaatcctagtcatactagtctaagtgggaattctatgatttcgtcg
aatactagctattcgggttcaattgcttctggttctgttgctcatcaatcgatgccgcct
agggttttcccgccttccccttatgtgggtagtggtcggagtatgtccccgtcgcctcag
aggcagaatgggacagatgatccaaatgaggtttataagaggaatgctattagtaagctt
gttgagagtgtacatagtgatgttgttgcgttgagaaagacgagggaggctgaaatggaa
ggtctatttagtgcccaagctatattgagacagcgggaggaacaacttaacaagggtttg
aaagagatgttcgatgaaaaggaggcgttagaacagcagttacagttggttttgactaat
gctgatgtattggaagggtggttgaaggacaatgaagaaaaaatgtcgaaaatggggaat
cataatgttgatgttgatgatgcgtttgagcattgtgatacgctttcgaagcagatgatt
gaatctagtgcctctgatttggcaatagaggatgtcatttattctttggataaggcggtt
caggatggagtgattccttttgatcagtacttgaggaatgtgaggctgttgtctagagaa
cagtttttccaccgggctactgctgcaaaagttagggctgctcagatgcaagctcatgtt
gctagtatggctgctagatcatcacaatatgtgatgtga
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