Amaranthus tricolor (tampala): 130804130
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Entry
130804130 CDS
T09367
Name
(RefSeq) eukaryotic initiation factor 4A-9
KO
K03257
translation initiation factor 4A
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130804130
03012 Translation factors [BR:
atri03012
]
130804130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130804130
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130804130
mRNA cycle factors
Stress granule specific factors
130804130
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
eIF-4
130804130
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130804130
Exosomal proteins of bladder cancer cells
130804130
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
DUF2780
Motif
Other DBs
NCBI-GeneID:
130804130
NCBI-ProteinID:
XP_057524448
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Position
17:complement(13835156..13841378)
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AA seq
413 aa
AA seq
DB search
MAGNAPEGSQFDARQYDNKMSELLSEEGSDFFTSYDEVYESFDKMGLHENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELVDCQALVLAPTREL
AQQIEKVMRALGDYLNVKVHACVGGTSVREDQRILAAGVHVVVGTPGRVFDMLRRQSLRA
NNIKMFVLDEADEMLSRGFKDQIYDIFQQLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVSINFVTREDEKMLFDIQKFYNVVIEELPANVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaatgctcctgaaggatcacagtttgatgcccgtcagtatgacaacaaaatg
agcgaattactttctgaagaaggaagtgattttttcacctcttatgatgaggtttatgaa
agctttgataagatgggtttgcatgagaatcttctcagaggaatttatgcttatggtttt
gagaaaccctctgctattcaacaaaggggaattgttcctttttgcaaaggtcttgatgtg
attcagcaagcacaatctggtactggaaagacagctactttctgttctggtatcctgcag
cagttggactatgagttagtggattgccaagctcttgttttggctcctaccagagagctt
gctcaacaaattgagaaggtcatgcgtgctcttggtgattatttgaatgttaaggttcat
gcttgcgtcggaggaacaagtgttcgggaggatcaaagaatccttgctgctggagtacat
gttgttgttggtactcctggacgtgtttttgacatgttgcgtagacaatctcttcgagct
aataatatcaaaatgtttgttcttgatgaggctgatgagatgctttctcgaggttttaag
gaccagatttacgacattttccagcaactaccgccaaaaatccaagtcggagtattttct
gctactatgcctcctgaggcccttgagattaccagaaagttcatgaataagcctgttaga
attctagtgaagcgagatgagctcaccctcgagggtatcaagcaattctatgtgaatgtt
gacaaggaagagtggaagctcgacactctttgtgacctttatgaaaccttggcaatcacc
caaagtgtcatctttgtgaacactagaagaaaggttgactggttgaccgatcaaatgaga
agccgtgatcacacagtatcagccacacatggtgacatggaccagaacactagagacatc
attatgcgtgagttccgttctgggtcatctcgtgtcctcattaccactgacctccttgct
cgtggtatagatgtgcaacaagtatcattggttatcaactacgatctgcctacccaacca
gagaactatttgcataggataggacgtagtggtcgatttggaaggaagggtgtttcaatc
aattttgttacccgtgaggatgagaagatgctttttgatatccagaaattctacaatgtc
gtcattgaggaactccccgccaatgttgctgatcttatatga
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