Amaranthus tricolor (tampala): 130804148
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Entry
130804148 CDS
T09367
Name
(RefSeq) eukaryotic initiation factor 4A-9-like
KO
K03257
translation initiation factor 4A
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130804148
03012 Translation factors [BR:
atri03012
]
130804148
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130804148
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130804148
mRNA cycle factors
Stress granule specific factors
130804148
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
eIF-4
130804148
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130804148
Exosomal proteins of bladder cancer cells
130804148
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Flavi_DEAD
Ubiquitin_TPR1
Motif
Other DBs
NCBI-GeneID:
130804148
NCBI-ProteinID:
XP_057524468
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All DBs
Position
17:17097331..17100936
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AA seq
413 aa
AA seq
DB search
MAGLAPEGSQFDARHYDNKMSELLSEEGNDFFTSYDEVHDSFDKMGLDENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELIDCQALVLAPTREL
AQQIEKVMRALGDYLNVKVHACVGGTSVREDQKILASGVHVVVGTPGRVFDMLRRQSLRA
NNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVSINFVTRDDEKMLYDIQKFYNVVVEELPANVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctggactcgcacctgaaggatcacagtttgatgctcgtcattatgacaacaaaatg
tctgaattactatctgaggaaggaaatgattttttcacctcgtatgatgaagttcacgat
agctttgataaaatgggtttagatgagaaccttctcagaggaatctatgcctatggtttt
gagaaaccctctgccattcaacaaaggggaattgttcctttttgcaagggtcttgatgtg
attcagcaagctcaatctggtactggaaagactgccacattttgttcgggtatcctgcag
cagttggactatgaattgattgattgccaagctcttgttcttgctccaaccagggagctt
gctcaacaaatcgagaaggttatgcgagccctcggtgattacttgaatgttaaggttcat
gcttgtgttggaggaacaagcgttcgtgaggatcaaaaaatccttgcttcaggagttcac
gtcgttgttggtacccctggacgtgtttttgacatgttgcgtagacaatctcttcgtgct
aataatatcaaaatgtttgttcttgatgaggctgatgagatgctttctagaggtttcaag
gatcagatttatgacattttccaactactaccaccaaaaatccaagttggagtattttct
gcgacaatgccccctgaggcccttgagattaccagaaagttcatgaataagccagtgaga
attcttgtgaaacgagatgagctcacccttgagggtattaagcaattctacgtgaacgtt
gacaaggaagagtggaagcttgacactctttgtgacctttacgaaaccttggcaatcacc
caaagtgtgatctttgtgaacacaaggaggaaggtcgactggttgaccgatcaaatgaga
agccgtgatcacaccgtatcagccacacatggtgacatggaccagaacaccagggacatc
attatgcgtgaattccgatctgggtcatcccgtgtcctcatcaccactgacctccttgct
cgtggtatcgacgtgcagcaagtatcactggtcattaactacgatctgcctacccaaccg
gagaactatttgcacaggataggacgtagtggtcgatttggaagaaagggtgtttcaatc
aactttgtcacccgtgatgacgagaagatgctttacgatatccagaaattctacaatgtg
gtggtcgaggagctccctgcaaacgtcgctgatcttatatga
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