Amaranthus tricolor (tampala): 130804175
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Entry
130804175 CDS
T09367
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04016
MAPK signaling pathway - plant
atri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
130804175
04075 Plant hormone signal transduction
130804175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130804175
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130804175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
130804175
NCBI-ProteinID:
XP_057524511
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Position
17:16425639..16429300
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AA seq
639 aa
AA seq
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MSQIVNYSENEEFYHGGSIYSNPKEAGSFLSLRIVNHVDVYFPNKRARINAPVGGDFLGQ
KKQVSLDSLPDECLYEIFRRLPGYQERSSCASVSKRWLMLVSSIPCEDLCNKNKVAADEG
EEIDSDGFLTRSLEGKKATDVRLAAAAVGSGGLGGLGKLMIRGTNSVRGVTDLGLKAVSR
CCPSLKSLSIWNVSSIGDEGLVEISNGCRRLEKLDLCNCPSITSKGLIAIAKNCSGLTLL
SIEGCQLIGNEGLQAIGQFCPNLKSVTIKDCPLVGDQGIATLMSSASFVLTKLKLQGLNV
TDLSLAVIGHYGKVVSDLFLANLQNVNEKGFWVMGNAQGLQHLKSFTISSCQGVTDVAVE
ALGKGCPNLKQFALKKCAFLSDNGLISFAKAARSLESLQFKECHRITQIGFFGLLLNCGL
KLKDVTMSSCFGFKDMVLGFPLPNKSAPLRSVTISNCPGLGDMTLAMLAKLCPQLQCVNF
NGLPSITDAGLLSLIESCDAGAGLVKVGLADCVNVTDDIVIALAKFHGGTLELLNLEGCG
KVTDTGLVAIADDCLLLNELDVSKCAITDFGVASLARSKHLSLQILSLSGCSMISNKCLP
FLAKLGQSLMGLNIQNCNSISSTVTDMLEDRLFRCDILS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatcgtcaattacagtgaaaatgaggaattttaccatgggggatccatatac
tcaaaccccaaggaagctggtagctttttgtcccttcgtattgttaaccatgtggatgtt
tacttcccaaacaaaagagctaggatcaatgcccctgttggaggagactttttagggcaa
aaaaagcaggtttctcttgattccctcccagatgagtgtttgtatgagatcttcaggcgt
ttgccgggataccaagaaaggagttcttgtgccagcgtttcgaaacgctggcttatgctt
gttagtagcatcccttgtgaggatctgtgcaataagaataaggttgctgctgatgagggt
gaggagatcgacagcgatgggtttcttactaggagtttggagggtaagaaggccaccgat
gttagacttgctgctgcggctgtgggaagtggtggtcttggtggattaggtaagctgatg
atcaggggaacgaactctgttcgtggagttactgatcttggtttgaaggctgtttctcga
tgctgcccttctcttaagagtctttccatctggaatgtttcgtccatcggagatgaaggt
ctcgttgagatttctaatggatgtcgtcgccttgagaaacttgatctttgcaactgcccg
tctattaccagcaagggtttgatcgcaatcgccaagaattgttccggcttgaccttattg
agtattgagggttgtcaacttattggtaatgaaggtttgcaagctattgggcagttctgt
ccaaacctcaaatctgttaccatcaaggactgcccacttgttggtgatcagggtatcgca
actttgatgtcatcagcttctttcgtcctcaccaagttgaagcttcagggtttgaatgtt
actgatctttcccttgcagtgatcggtcattacggaaaagttgtttctgatctttttttg
gccaaccttcaaaatgtgaatgaaaagggtttctgggtcatgggtaatgcccagggtctt
caacatctaaagtcattcaccatttcctcgtgccaaggagtcacagacgttgcagtcgaa
gctttgggaaaaggctgtcccaatttgaagcagttcgctctgaagaagtgcgctttcttg
tccgacaatggattgatttcctttgccaaagctgcaaggtctctcgagagcctgcaattt
aaggagtgccacaggatcacccaaatcgggttttttggtcttttattgaactgtggtctt
aagttgaaggatgtaactatgtctagctgctttggtttcaaggacatggtgttgggattc
cccctcccgaacaaatccgccccacttcgttccgtgacaatcagcaactgccctgggctc
ggagacatgaccttggctatgttggcaaagttgtgccctcaattgcaatgtgtaaacttt
aacggtcttccctccatcaccgatgccggtcttctatcccttatcgagagttgtgatgct
ggtgccggtcttgtcaaggtgggtctcgcggactgtgttaatgtgaccgacgacattgtc
atcgcattggcaaagtttcatggcggaaccctagagttgttgaaccttgaaggttgtggt
aaggttaccgatacagggttggtggctattgccgatgattgccttttgctcaatgaactc
gatgtttctaagtgcgctatcacagactttggtgtcgcatctttggctcgctcgaagcat
ctgagcttacagatcctctctctttccgggtgctcgatgatctccaacaagtgcttgcct
ttcttggcaaagttgggtcagtctcttatgggactcaacattcaaaactgcaactcgatc
agcagcaccgtcactgatatgctcgaggatcggctctttagatgtgacatcctttcctaa
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