Amaranthus tricolor (tampala): 130804292
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Entry
130804292 CDS
T09367
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130804292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atri04040
]
130804292
Ion channels [BR:
atri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130804292
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3382
Motif
Other DBs
NCBI-GeneID:
130804292
NCBI-ProteinID:
XP_057524662
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Position
17:9065084..9078237
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AA seq
721 aa
AA seq
DB search
MPPSFSLPFLHFLEILRSAFAKSPTEESPSNVAGNGSNHSSKYNSNEDDNFTSGSWSNPI
ECYACTQVGVPVFHSTSCDQAGQPEWEASAGSSLYPTRPGTKQSRGKRPLLWPKGLFGPV
VDPRSGRVRKWNRVILIARAVALAVDPVFFYALSIGKGGSCLYMDGVLAAVVTLIRTGVD
IVHLWHVWLQFRLAFVSRESLVIGSGKLVWDARAIASHYVRSLKGFWFDLYVILPIPQVV
FWSVVPTLLRQDKIKILMTILLLIFLFQFLPKAYHSFYLMRKMQKVTGYIFGTIWWGFGL
NLVAYFIASHVVGGCWYVLAIQRVAACLIQQCSRIGKCNKSLSCAKGICYEFLQQPNTIA
RCGANSTIHRVSFCLNDNGPFSYGIYSSAVPVISSNAIIIKIFYPISWGLFQLSTFGNNL
TPTSQWAEVLFCMCLVLGGLMLFTLLIGNIQVFLHTVMAKKRRMQLRCRDMEWWMRRRQL
PSRLRHRVRHFERQSWLTTGGVNEMELIKDLPEGLRRDIKRYLCLDLMKKVPLFRCLDDL
ILDNICDRVKPLIYCKDEKIMREGDPVQRMVFIVKGRIQSKQNLSKGIVAEDILGAGAFL
GDELLSWSLRRPFIHRLPASSATLFCIESTEAFGLDAYDLHYITEHFRYKFANESLRRTL
RYHSSIWRTWAAVNIQFAWHRYVKRSKGLVPSVDSRNADNDKRLLQFAAMFMSIRPHDHL
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgccgccctccttctctctccctttcctccatttcctcgagattctgcgaagcgcattt
gcaaaatctccaacagaagagagtccttcaaacgtagcaggaaatggaagcaatcacagc
agtaagtacaacagcaatgaagatgataatttcactagtggaagctggagcaaccccatt
gagtgttacgcatgcactcaagtaggcgttccagttttccactcaacaagttgtgatcag
gcgggccaacccgaatgggaggcttccgctggatcctctctttacccaacccgtccggga
accaaacaatcccgtggaaaacgaccgttactgtggcctaaaggactattcgggccggtt
gtagacccaagaagcgggagggtacggaagtggaaccgggttatactgattgcacgtgcg
gtagcattagccgttgatcctgtgttcttctatgcgctgtccatcggaaaaggtggttcg
tgtctgtatatggatggggttttagcagcggttgtgacacttattcgcacgggtgtggat
attgttcatctgtggcacgtgtggcttcaattccggctggcgttcgtgtcaagggaatca
ctggtgattggaagcgggaaactcgtgtgggacgcacgtgcaattgcgtcacattatgtg
cgttctttgaaaggtttctggtttgatctttatgttattctccctataccacaggtcgta
ttttggtctgtggtaccaacattactcagacaggataaaataaaaattttgatgacgata
ctcctgctgatatttttgttccaattcctgcccaaagcctaccacagcttctacttaatg
aggaaaatgcaaaaggtcactggatacatctttggaacaatttggtggggatttggactt
aatcttgttgcttacttcattgcttctcatgttgttggaggatgttggtatgttcttgca
atacaacgcgttgcagcttgcctcattcaacaatgtagtaggataggaaagtgtaacaag
tccctgtcttgcgccaagggaatttgttatgaatttttgcagcaaccgaatacgatagca
agatgtggtgccaattccacgatccatcgagtgtcgttttgcttgaatgataacggacct
ttcagttatggcatttatagttcagccgtgcctgtcatttctagcaatgccatcatcatt
aagattttttatccgatttcttggggtttgtttcaactaagcacctttggcaataatctt
actccaacaagccaatgggcagaagttttgttctgtatgtgcctcgttcttggtggctta
atgcttttcaccttgttgataggaaacattcaggtatttctgcataccgtaatggcaaag
aagagaagaatgcagttaagatgtcgagatatggaatggtggatgaggcgaaggcaattg
ccatcgcgtttaagacatagagtccgtcactttgaacgtcaaagctggttgactaccgga
ggagttaatgagatggagttaataaaagatttgcctgaaggccttcgtcgtgacatcaaa
cgctatctttgtcttgatctgatgaaaaaggtaccactatttcgctgcttggatgacctt
atccttgataacatatgtgacagagttaaaccattgatttattgtaaagatgaaaagata
atgagggaaggtgatccagtacaaagaatggtattcatagtaaaagggagaatacaaagc
aaacaaaatctaagcaaagggatagtagcagaagatattcttggtgcaggagcattctta
ggtgatgagctgttatcttggagtcttcgaagaccatttattcatcgactacccgcttca
tcagccactttattctgtatcgaatcaacagaagcttttggacttgatgcatacgacttg
cattacatcacagaacattttcgttacaagtttgcgaatgaaagtttgaggcggacattg
agatatcattcttcgatttggaggacttgggctgccgtaaatattcaatttgcttggcat
cgttatgtgaagaggagtaaaggtttggtaccgagtgttgattcgcgtaatgcagataat
gataaacgtcttcttcaatttgctgctatgtttatgtctataaggcctcatgatcatctt
gactag
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