Amaranthus tricolor (tampala): 130804328
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Entry
130804328 CDS
T09367
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00260
Glycine, serine and threonine metabolism
atri00460
Cyanoamino acid metabolism
atri00630
Glyoxylate and dicarboxylate metabolism
atri00670
One carbon pool by folate
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
atri01200
Carbon metabolism
atri01230
Biosynthesis of amino acids
atri01240
Biosynthesis of cofactors
Module
atri_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130804328
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130804328
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
130804328
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130804328
Enzymes [BR:
atri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130804328
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
130804328
NCBI-ProteinID:
XP_057524706
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Position
17:complement(14428597..14433485)
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AA seq
531 aa
AA seq
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MQTYCGAGTSTTMGSIPNPKIPLFPQFNQKGFNHLSFFDYSIHFSKPSRFSFVSNSLVTG
RPPSSVSVPAPGTGDDSSGFKDNGLSDTDPEVYNIIGKEKERQFKSLELIASENFTSRAV
MEAVGSCLTNKYSEGLPGKRYYGGNEHIDELEILCQQRALEAFQLDGEKWGVNVQPLSGS
PANFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV
DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVV
GNPFDYCDVVTTTTHKSLRGPRGGMIFYKKDTILGVDLESSINNAVFPGLQGGPHNHTIG
GLAVCLKHAKSQEFKAYQNAVISNSRALASRLVELGYKLVSGGSDNHLVLVDLRPLGVDG
ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFKETEFVATADFIHEGIQ
ITLEATKLRPKTKLQEFLKFVASPEFPLRDRVLDLQKRVEVLTTQFPLPGL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttattgtggtgcaggaacatcaacaactatgggttcaatcccaaaccccaaa
attcccctttttcctcaattcaatcaaaaagggtttaatcatttgagttttttcgattat
tccatccatttctccaagccttctcgtttttcttttgtttctaatagtttagttactggt
agaccaccctcttctgtctctgttcctgctcctggtactggagatgattcaagcggcttc
aaagataatggtctgagtgataccgatccagaagtgtataatatcattggcaaggaaaag
gaaaggcagtttaaaagtttggaacttattgcctcggaaaattttacttctagagctgtt
atggaggctgttggttcatgtctcactaacaaatattctgaggggttgccgggtaaacgg
tattacggtggaaatgaacatattgacgagctcgagattctctgtcagcagagggctttg
gaagcatttcagctggatggggaaaagtggggtgttaatgttcaaccattgtctggttcg
cctgcaaattttgaggtttacactgcacttttaaagccacatgaccgtatcatgggttta
gatttacctcatggaggacatttgtctcacggtttcatgactcctaaaagacgagtttca
ggaacatcgatctattttgaatcgatgccttatcggcttgacgaatctacaggtttggtt
gattacgacatgcttgagaaaactgctatcctgtttcgaccgaaactcattattgctggt
gccagtgcgtatcctcgagattttgattatcctcgtatgaggaagattgcggatgcagtt
ggtgctttccttatgatggatatggcacatataagtgggcttgttgctgcctctgtcgtt
ggtaacccatttgattactgtgatgtagtcacaactactactcacaagtctctacgagga
cctagaggaggaatgatcttctacaaaaaggatacaattttgggagttgatctagaatct
tccatcaataatgccgtctttcctggcttacagggtggcccacataaccacaccatagga
ggactagcagtttgccttaagcatgcaaaatctcaagagtttaaggcgtaccaaaacgct
gtaatctcaaattctagagctcttgcgagccgactggttgaattgggatacaaactagta
tctggtgggagcgataaccaccttgttcttgttgatcttaggccattgggagttgatggt
gctcgtgttgagaaaattcttgatatggcttccattacactgaataagaattcggttcct
ggtgacaagagtgccttagtccctggcggcatacgtattggttcacccgccatgacaacg
agagggtttaaagaaacagagtttgttgccaccgcagactttattcatgaaggaatccaa
ataactcttgaagcaaccaagttacgtcccaaaacaaaactccaagaatttttgaaattt
gtcgcatctcccgaattccccttgagggatcgtgttttagaccttcagaaacgagtggaa
gtccttaccacccaattcccgttacctgggttgtga
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