Amaranthus tricolor (tampala): 130804342
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Entry
130804342 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130804342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130804342
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130804342
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130804342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
FAM104
Motif
Other DBs
NCBI-GeneID:
130804342
NCBI-ProteinID:
XP_057524729
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All DBs
Position
17:19348100..19351733
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AA seq
310 aa
AA seq
DB search
MAKFSIFNDEDEDDEEFIIPSPKRRRTYTPQSTSALNHDHQQQSSSSQDEHNTDSSVGST
KSSGPVSIILSDPDVFDCPICFCPLTIPVFQCDNGHIACSTCCNNLVDKCPSCCGKIGNN
RCRAIEKVIESVQVSCCYLRYGCKETINYCRKHEHEEKCLYAPCLCPFRDCLFRGSSKRL
TNHMRKEHAGRVIRFRYNSIFSISPQMDEKVLVLQEDKDGTLFILSHGSKIVVRCFNPTL
SNGRFSYDLVLRRGSTSLKFQSFTHCTAEKYSDPPSEDYVLIPAYFYLSGGRAKLEICIW
SPEKSRAQIT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattctcaatctttaatgatgaagatgaagatgatgaagaattcatcatccct
agtccaaagagaagaagaacttacacccctcaatccacttcagcattgaatcatgatcat
caacaacagtcatcatcatcacaagatgaacataatacggattcttctgtgggatctacc
aagtcaagtgggcccgtttcaataattttatccgacccagatgtcttcgattgccccatc
tgtttctgtcctttgactattcctgtctttcagtgtgacaatggccatatagcttgctct
acatgctgcaacaaccttgtcgacaaatgcccctcatgctgtggcaaaatcggaaataat
cgatgccgggccattgaaaaggttatagaatcagttcaagtatcatgttgttatttaagg
tatggctgcaaagaaacgatcaattattgtagaaaacacgagcatgaggagaagtgcttg
tatgcaccatgtttgtgccctttccgcgactgcctctttcgaggttcgtccaagagactt
acaaaccacatgcgtaaagagcatgcaggccgtgtaattcgcttccgttacaactctatc
ttctctatatctcctcagatggatgaaaaagttcttgttcttcaggaagataaagatgga
accttgttcatcctgagccacggaagcaaaatagtcgttagatgctttaatccaaccctt
tcaaatggaaggttttcttatgatcttgtattaagacgaggtagcacctcgctcaaattc
cagtccttcacacattgtactgcagaaaagtacagtgatcctccttctgaggattatgtt
ctgatcccggcttacttctacctcagtggtggccgtgccaagttggaaatttgcatatgg
agccctgaaaaatctcgtgctcaaatcacttga
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