Amaranthus tricolor (tampala): 130804350
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Entry
130804350 CDS
T09367
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130804350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130804350
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130804350
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130804350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
130804350
NCBI-ProteinID:
XP_057524745
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All DBs
Position
17:8304605..8308918
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AA seq
309 aa
AA seq
DB search
MANKMATASPYFDDMRGKPEVIDPPSSDDMVDVVEHVMDPSQSATKPNLTVSSSVNELLE
CPVCLTAMYPPIHQCSNGHTICSNCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCK
YQSFGCIGIYPYYSKLKHESQCSFRPYTCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNG
STFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDA
KNYTYSLEVGGNGRKLSWQGVPRSIRDSHRKVRDSFDGLIIQRSMALFFSGGDRKELKLR
VTGRIWKEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaagatggctaccgcaagtccatattttgatgacatgagggggaagcctgaa
gttattgaccctccttctagtgatgatatggttgatgtcgttgaacatgtaatggatccg
tcacaaagtgctaccaaaccaaacctgactgtatctagcagtgttaatgagctcctggag
tgcccagtttgcctgactgctatgtaccctcctatccaccagtgttcaaatggccacaca
atatgctcaaattgcaagcccagggtgcacaaccgatgcccaacttgccggcatgaactt
ggtaatattagatgccttgctttggagaaggtggctgcatcccttgaacttccctgtaaa
tatcagagttttggatgcattggcatttatccttactatagcaagctaaagcatgaatca
caatgttcatttagaccctatacatgcccttatgctggatcagagtgcactgtcattggt
gatatcccatacctggttgcccatcttaaggatgatcataaagtcgacatgcacaacgga
agtacatttaaccatcgttatgtgaagtcaaatccgcatgaggttgaaaatgccacttgg
atgcttacggtcttcagttgctttgggcaatacttctgccttcattttgaagcatttcag
cttggtatggctcctgtctatatagcgttcttacgattcatgggagatgacaatgatgca
aagaattacacctacagcctcgaggtaggaggaaatggaagaaagttaagctggcaaggg
gtgcctaggagcattagggatagccatcgcaaagtccgggacagctttgatggactcatc
atccaacggagtatggctcttttcttttcagggggtgatcggaaagagttgaagctgagg
gtaaccggaagaatttggaaagaacagtaa
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