Amaranthus tricolor (tampala): 130804467
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Entry
130804467 CDS
T09367
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130804467
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130804467
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130804467
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130804467
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130804467
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130804467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Motif
Other DBs
NCBI-GeneID:
130804467
NCBI-ProteinID:
XP_057524889
LinkDB
All DBs
Position
17:complement(7131826..7158780)
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AA seq
1116 aa
AA seq
DB search
MTMMTQPALDDEEEMLVPHSDVVVEGPQPMEVASQADANNVAENQEGEEPPTSKFTWTID
NFTRLNIKKHYSDAFIIGGYKWRILIFPKGNNVEYLSMYLDVADANNLPCGWNRFAAFCL
TVVNQAHHKYSIRKETQHQFNGRESDWGFTSFMPLGELYDPSRGYLVNDTLVIEAEVAVR
RVTDYWAYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKSVYHMPTTENDNPSGSI
PLALQSLFYKLQYNDTSVSTKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGMIQQLFEGHHMNYIECVNVNYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGD
NKYHAEDHGLQDAKKGVLFLDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLAPGADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDMK
KALEEQYGGEEELPQTNPAFNNAPFKFTKYSNAYMLVYVRESDKDKVVCDVDEKDIAEHL
RIRLKKEQELKEDKRKYKAQAHLYTIIKVARDNDLAVQIGRDIYFDLVDHDKVRSFRVQK
QMLFNAFKEDVAKEFGIPVQFQRYWIWAKRQNHTYRPNRPLSPNEELQAVGQLREASNKA
HNAELRLFLEVEMGMDLHPIAPPDKTREEILLFFKLYDPAKEELRYVGRMFVKGSGKPAE
ILTKLNVMAGFALDEEIELFEEIKFEPIVMCEHLDKLTTFRASQLEDGDIICFQKIPPVN
GADKCRYPDVPSFLEYVHNRQVVHFRSLERPKEDDFCLELSKVNTYDDVVERVAQQLGLD
DPSKIRLTSHNSYSQQPRPQPIKYRGVDHLADMLISHNQASDVLHYEVLDIPLPELQGLK
NLKVTFHDATKDEVVIHNVRLPKQSTVGDVLDELKTKVELSHPDAELRLLEVFHHKIYKI
FPTNENIESINDQYWTVRAEEIPEEEKNLQTNDRLIHVYHFTKDTAQNQMQPQNFGEPFL
LVIHEGETLAEIKMRLQKKLRVPDEEFSKWKFAFWSLNRPEYLQDTDIVSSRFQRRDVYG
AWEQYLGLEHTDTSPKRAYIANQNRHAYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacccagcctgctttagatgacgaggaggagatgctggtgcctcattct
gatgttgtcgtagaaggtcctcagcctatggaagttgcatcacaagcagatgccaataat
gtggctgagaatcaggagggggaggagcctccaacttctaagtttacatggacgattgat
aactttactaggttgaacattaagaagcattactcggatgcttttatcattgggggttat
aaatggcggatcttgatttttccaaaagggaataatgtggagtatctctccatgtatctt
gatgttgcggatgctaataatctaccatgtggttggaatagatttgctgctttttgcttg
acagtggttaatcaagctcatcataagtattccataagaaaagagactcaacatcaattc
aacggtagagagagtgattggggcttcacgtcttttatgcctcttggcgaattatatgat
ccttctagaggatatcttgttaatgatactttggtgattgaagctgaggttgcggttcgc
cgtgtaacggattattgggcgtatgactcaaaaaaagagacaggctttgttggactcaag
aatcagggggcgacttgttacatgaattctctgctccaaactttatatcatattccttac
tttagaaagtctgtctaccatatgccaactaccgagaatgataatccttctggcagcatt
cctttggctttgcaaagtttgttctacaagcttcaatataatgatacaagtgtctcgaca
aaagaattgaccaagtctttcggatgggacacatatgattccttcatgcaacatgatgta
caggaactcaacagagttctgtgtgagaagcttgaagacaagatgaagggaactgttgtg
gagggaatgatacaacaattatttgaagggcatcatatgaactatattgaatgtgttaat
gttaactataaatctactaggaaggaatcattttatgatcttcaattagatgtcaaaggc
tgtcgagatgtgtatgattcttttgacaagtatgtggaagttgagcgtcttgaaggagat
aataagtaccatgctgaggatcatggtttacaggatgccaagaaaggtgttctattcctt
gacttccctcccgtgcttcaacttcaactcaaaaggtttgaatatgactttatgcgagac
actatggtaaagatcaatgatcgttatgagtttcctcttcagcttgatcttgatagagaa
aatggtaaatatcttgcgcctggggcagataggagtgttcgaaacctatatacacttcac
agtgttttggtacatagtggtggagttcatgggggacactattatgcgtttattaggcca
accctttctgaccagtggttcaaatttgatgatgaacgcgtaactaaagaggatatgaaa
aaggcgttagaagagcagtatggtggtgaagaagagttgccacagacaaatcctgccttt
aataatgcccctttcaagtttacaaaatattcaaatgcctatatgcttgtgtatgtacgc
gaaagtgacaaggacaaagtagtttgtgatgtggatgagaaagatattgcagaacatctt
aggatacgactgaagaaggaacaggaattgaaggaagacaaaaggaagtacaaagctcaa
gcacatctttatactatcataaaggttgcacgagataatgatcttgcagtacagattgga
agagatatttattttgatcttgtggatcatgataaagtgcgtagtttccgtgttcagaag
cagatgctgttcaatgcatttaaggaggatgttgctaaagaatttggtataccagttcaa
ttccaacgatattggatatgggcaaagcgccagaatcatacttatcgtcctaatcggcct
ttatcacccaatgaagaacttcaagcggtaggacaattgagggaggcatcaaataaggca
cacaatgctgaacttaggttatttctggaagtagaaatggggatggatcttcacccaatc
gctcctccggataaaacaagagaggaaattttgctcttttttaagctttatgatcctgca
aaggaagaacttcgatatgttggtagaatgtttgttaagggttctggaaaaccagctgaa
attttgactaaactcaatgtgatggctggttttgctcttgatgaggagattgaacttttt
gaggagattaagtttgaaccaattgtcatgtgtgagcaccttgataagctaacaacattt
agggcaagccagttagaagatggtgacatcatctgcttccagaaaattcctcctgttaat
ggtgcagataaatgccgttatcctgatgtaccgtcgttcttagagtatgtgcacaatcgt
caggttgtccattttcgttctctggagagacctaaggaggatgatttctgcctagagttg
tcaaaagtaaatacatatgatgacgttgttgaaagagttgctcagcaacttggtctggat
gatccttcaaagattaggctgacatctcataatagctactctcagcaacccagaccccag
cctattaaatacagaggagtagatcatttggctgacatgctgattagtcacaatcaggcc
tctgatgtcttgcattatgaagttcttgacattcctttaccggagttgcaaggactgaaa
aatcttaaagtaacttttcatgatgcaacaaaggatgaggttgtcattcacaatgttaga
ttgccgaagcaaagtaccgttggagatgtacttgatgagctgaagacaaaggtggaactt
tcacatcctgacgcagagctgagattacttgaagtttttcaccataaaatctacaagata
tttccaactaatgaaaatattgaaagtataaatgaccagtactggacagtgcgtgcagag
gagattcctgaagaagaaaagaacttgcaaaccaatgatcgtttgattcatgtctaccat
tttaccaaggacactgcacagaatcagatgcaaccgcagaactttggggaacccttttta
ttagttattcatgaaggggagacactagctgaaattaaaatgagattacaaaaaaagttg
cgtgttcctgatgaagaattttccaagtggaagtttgcattttggtcactaaaccggcca
gagtatctgcaggacacagacattgtatccagtcgttttcagaggagagatgtttatggt
gcctgggagcagtacctgggtttggagcatactgatacctctccgaaaagggcttacata
gccaatcagaaccgtcatgcatatgagaagccagtaaaaatttacaactga
DBGET
integrated database retrieval system
