Amaranthus tricolor (tampala): 130804589
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Entry
130804589 CDS
T09367
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130804589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130804589
03036 Chromosome and associated proteins [BR:
atri03036
]
130804589
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130804589
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130804589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
130804589
NCBI-ProteinID:
XP_057525061
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Position
17:15146844..15156675
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AA seq
719 aa
AA seq
DB search
MLAPASNSDEEFSVLQLIPSSEKQQAVIHPIHHSLTSPISRIAISWSRGNSIRLSLLPQP
SSNVRESDDSADGTVVEVKLDGGNGGIKDDAQWRRIVYGSVAPFAMFQSRKNSALALSKL
SIGALADSEWWEYAMEYSKEINSLLGTTKSTADLVVDDPESILMVDEEKNSLKAAWELLE
LFYADKQSQAWLPERLVDWLADYDSLLSETQSTVHSKLVDFQHHLLNLQVIEDDPKYWDC
LMSALALGWLDIVVKLLRLHGSYQIEQLGRRETENGLVEAVVVLVSKMPRLRPELHAGRL
GECYKSRTDFAKGWEIWHARVTKLECSAFWVECGHQKTKEGLRKLLQIMLGNSEHISAST
CHWIELYTAHFLYIRPFTVGLESMYSLAQKCIQLKPMSRHHSLMGILVGILGENTEVVLA
ECSRAFGPWMVTHAIELLTSGNDQSEILLREVRPNLGGVSIEELHRLVYAQVLASHQLTW
QIAPVYLTSCRPGLGLLDILLYRQPVHFKQGLLKNLEICRLYELEPISSNIMKIAGIHHW
KHGRKGSGIFWLQQAQDECRLNKIAQQLFDFVGKSISEESFKQWEGLIELLGSDTRTAGG
LEFLHKYRDFKKSLQQVDDWKTTDAARQAVESLILLMKNPSTPQRFWLPLLYDSLKLLTW
REGPILDVPQTNLLLNKLQELSMAKLRPDYVEADLPSQALSSVRLALATNLGRAILEEQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaccggcatcaaattccgacgaagaattttctgtactacaactaattccgtct
tccgaaaaacagcaggcagtgattcatccaattcaccattctctaacttccccaatttct
cgcattgctattagctggtctcgtggtaactctattcgactctctctcctacctcaaccc
tcttcgaatgtcagagaatcagatgattccgctgacggaactgttgtcgaggtcaagctt
gatggcggaaatggcggaattaaagatgatgcacaatggaggagaatcgtttatggttct
gttgctccttttgcgatgtttcaaagtcggaagaattccgctttggctttgtcgaaactg
tccattggtgctttggctgattctgagtggtgggagtatgccatggagtatagtaaggag
ataaattcacttcttggtacaacaaagtcgacagctgatttggttgttgatgaccccgaa
agtattctgatggttgatgaagagaaaaatagtctaaaggctgcatgggagctactggaa
cttttttatgcagataagcaatctcaagcttggcttcccgaacgtctggttgattggcta
gctgattatgatagcttgctttcagaaactcaatctactgtgcattcaaaacttgtagat
tttcaacatcatcttttgaacttacaggtgattgaggatgatccaaaatactgggattgt
ttgatgtctgcactagctcttggctggctggatattgtggtcaaactattgcgtctacat
gggtcttatcaaattgagcagctaggaagacgtgagacagaaaatgggcttgttgaagca
gtagttgttcttgtgtcaaaaatgccgcgtctacggcctgaattacatgctggaaggttg
ggggaatgctataaaagccggactgactttgcaaagggttgggaaatatggcatgcacga
gttactaaactggagtgcagtgctttctgggttgagtgtggacaccagaaaaccaaagag
ggtttgagaaaacttctacagatcatgctaggaaactcagagcatatttctgcttcaaca
tgtcattggattgaactttacactgcccactttctatacatcaggccattcacagtgggg
ttagaaagtatgtacagccttgctcagaaatgcattcagttgaagcctatgtcacgtcat
catagcttaatgggaattctagttggaattcttggagaaaatactgaggttgtgctagca
gaatgctctagagcttttggcccatggatggtgacccatgccatagagttgttgacttct
ggaaatgaccagtcagagattcttttgcgtgaagtgcgcccgaacttaggaggagttagt
attgaggagctccatcgacttgtctatgctcaagttcttgcctctcatcaattaacttgg
cagattgcacctgtatacttgacatcatgcagacctggattgggcttgctggatatttta
ttgtacagacaacctgttcactttaagcaaggcttgcttaagaacttggagatctgccgt
ttgtacgaactcgagcctatcagttcaaacatcatgaagattgctggaatacatcattgg
aagcatggtcgaaaaggatctggtattttctggcttcaacaagctcaagatgaatgtcgt
ctcaataaaattgctcagcaattgtttgattttgtggggaaatcaatatccgaagagagc
tttaagcaatgggaaggattgattgaattgttaggttctgacacaagaactgctggaggc
ctagagtttctgcacaagtacagagatttcaagaaatccctgcagcaagttgatgattgg
aagactactgacgctgctaggcaagctgtggaatctcttatcctgctcatgaaaaaccca
tctacacctcagcggttctggttgcctcttctttatgactcgttgaagctgctcacgtgg
cgggagggtcctattcttgatgttccacagaccaatctactattgaataagctgcaagag
ctgtccatggctaagctgcgccctgattatgttgaagcagacttgccatctcaagccttg
agtagtgttcggctggctcttgctacaaatcttgggcgtgctattcttgaagagcaatga
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