KEGG   Amaranthus tricolor (tampala): 130804617
Entry
130804617         CDS       T09367                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atri03400]
    130804617
Enzymes [BR:atri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     130804617
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    130804617
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII LAMTOR
Other DBs
NCBI-GeneID: 130804617
NCBI-ProteinID: XP_057525102
LinkDB
Position
17:complement(15581270..15601179)
AA seq 2157 aa
MDLNDNRSRIDQFFSSKKKRTLSPKIVKDSSPSAKGTLESYLVASQNESVKRNLALEIDL
STKNVNGETLLLSDDGFGGLVPSRPVPREDFGAGDAGSGSGSLDTSDQIQDFEDEENLIQ
YCSQVQQSSLHEQKVNGRKRFGSPSELVVEGTTSKRRHYVVDKENSLPDEQTPPCDKRAP
DAESCSSFSTEAINSTARVDFNKDFCKSQVSLRKCNKITESASMVNDCTTPAARCTKLSA
RETPVSLHGSSVFSLGEAFWNEAIQVIDGLCAQTGNDLHQVGNDTCMKKTQDVEFSRDCA
VESSNNKVNVPADIDASCSKQTELNTTLLGKFEETGELDASPLPVKHFDFSCDGKNLVVG
QPSHLCLENRDRVANDSTTWSSVDQKRPEDKNATPPVFETQKRRHDLLGPIGGNISKDSP
NRDIADFVVPVITNGATTPSSYMPLKDGLDISNWLPSAICNIYKRKGIAKLYPWQVDCLQ
IDGVLEKRNLVYCASTSAGKSFVAEILMLRRVIDSGKIALLVLPYVSICVEKAEHLEVLL
EPIGKHVRTYYGSQGGGTLPKDTSVAVCTIEKANSLVNRLLEEDRLSEVGIIVIDELHMV
ADPSRGYLLELLLTKLRYAAGEGNGEACSGGSSATSSGKGDIATGLQIVGMSATMPNVAA
VADWLHAALYQTEFRPVPLEEYIKVGNNIFDKSMEIVRTFPKSANLGGKDPDHVVELCNE
VVQDGHSVLIFCSSRKGCESTAKHISMYLKKFSVKIQDESSEFTDVFSAIDALRRCPVGL
DPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQ
PKIGCDFIDGTRYKQMAGRAGRTGIDAKGESVLICRPEEIKRIKALLNDSCPPLQSCLSE
DKNGMTHAILEVVASGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLRWLCHKKFLE
WNEHTKLYSATPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLATPTNVDV
EPDWELFYERFMQLSSIEQSVGNRVGIVEPFLMRMAHGAPVRTGSHSRNAIKGLHSRIDS
QLGVSKSNALSDEQSLRVCRRFYVALILSRLVQELPVGEVCAAFKVARGMVQALQENAGR
FASMVSLFCERLGWQDLEGLFAKFQNRFSFGVRAEIVELTTIPCVKGSRARALYKGGLRT
PLAIAEASITEIEKALFESVSWTAQADQAQRRIQLGIAKKIKNGARKIVLDRAEEARVTA
FSAFQSLGLTVPQLSCPVLLPTNDGSNSNGSSNTGENSTSSFAHYKRRGKDISIGRQESE
AGPDTNAGRSAKCLDTSLDISNKVNALPIGGIQVSSTPTKDLVPSSCSDLNETMSCIEAV
DKEGQRLGVEKSTSGRNKLRSNDKGPINVASASSLDTLLDLWESVGDFHFDVHFSKKSEA
NSLLAYEVHGLAICWENSLVYYVNLAKILRNSDFDSCNNECSGQVNSIDANILLVMKILR
WHRIVRILERTGVRKFTWNLKIQVQVLKNAGLSLNKNSLSRSINSAAIELVDGSFCRLPQ
VILHDGIDLCVVAWILWPEEEKSSNPSLEKEVKKRVSSEAAAAANQSGRWKNQMRRAAHN
GCCRRVAQVRALHCVLWKLLVSEGLVDALMSIELPLVHVLADMEDKGIGVDMEGCLKARK
LLSKKLKILENEAYKLAGVTFSLYMPADIANVLYDHLKLPIPEGRKKGKQHVSTDKQCLN
LLRLEHPIVPVIKEHRTLAKLLNCTLGSICSLAKLSMRTQRYTLHGHWLQTSTATGRLSM
EEPNLQCVAHMVEFRMHQNGDPQGDSDGTNLKINARDFFIPTEENWLLLTADYSQIELRL
MAHFSRDLFLIELLSKSDGDAFSMIASRWTGKPEHNVSSQEREQTKRLVYGILYGMGANS
LAEQLNCSADEAKEKIQSFKNSFPGVASWLHEAVAYCRQHGYVQTLKGRKRFLSKIKVGN
SKEKAKAERQAVNSICQGSAADIIKIAMINLYSVIAGFNTCNSTDALATKFSMLKGHCHI
LLQFLYERRLRLEGHGVHWSPSMSTMLENKVSRTKFFHLDDILWRGDYQRRLMQWHQVNK
KHAEKLRARHISYLVNKQPVKTQLDAFHFHAKICNKLQIHNSNGKIYISQTIFFRTT
NT seq 6474 nt   +upstreamnt  +downstreamnt
atggatctcaacgataatcgctcgcgtattgatcagtttttctcgtcaaagaaaaagaga
accctttcaccaaagattgttaaagattcatctcctagtgcaaaaggaactttggaaagt
tacttggtggcctcacagaatgaatctgtgaaaagaaatttggcactggagattgatttg
tctaccaaaaatgtaaatggagaaacccttttgcttagtgatgatggcttcgggggttta
gttccgtccagaccggttccaagagaagattttggtgctggagatgctggtagtggatca
ggtagcctggatacttcggaccaaattcaagattttgaggacgaggaaaatctaatacag
tattgcagtcaagtccagcaaagctcacttcatgagcaaaaagtgaatgggcgtaaaaga
tttggaagtccatcggagcttgttgtagaaggtacaacatctaagagaagacattatgtt
gttgataaagaaaactcactgccagatgagcagacgccaccttgtgataaaagggctcct
gatgctgagtcgtgcagcagtttttctactgaagctatcaactccaccgcacgagtagac
tttaataaagatttttgcaagtctcaagtcagcttaagaaaatgcaataaaattaccgag
tcggcttcaatggtgaatgactgcaccacgcctgctgcacgttgtacgaaattgagtgcc
cgtgaaactccagtatcacttcatgggagctctgtattctcactgggagaagcattttgg
aatgaggcaattcaagttatcgatggtttatgtgctcaaactggtaatgacttacaccaa
gtgggaaacgatacttgtatgaagaagactcaagatgtagagttctctcgtgattgtgct
gttgaaagttcaaataataaagtcaatgtgccagccgatattgatgctagttgttctaag
caaactgaacttaatactacattgctggggaagtttgaggaaactggggaactagacgca
tccccattgccagtaaagcattttgacttttcatgcgatggcaaaaatttggttgtaggt
cagccaagtcatctttgtttagaaaacagagatagagttgctaatgatagcacaacatgg
agttctgtagatcaaaagagaccagaagataagaatgcaacaccacctgtttttgaaact
cagaagaggaggcatgacttgttaggtcctattggtggcaacatcagtaaagattcacca
aatagggatattgcagactttgtggttcctgttatcaccaatggagctactactccttca
agttacatgccgttgaaagatgggttggacataagcaattggctcccctctgcaatatgc
aacatttataaaagaaaaggaatagcaaaactctatccttggcaggttgattgtcttcaa
atagatggcgttttggagaagagaaatctcgtttattgtgcatctacaagtgctgggaag
agttttgttgctgagatcttgatgttgagacgtgtcatagactctgggaaaattgccctg
ctagtgctgccttatgtttcaatctgtgttgaaaaggcagaacatctcgaggtcttgttg
gaacccattggcaagcatgtacgtacttattatgggagccaaggcggaggaacacttcct
aaagatacatcagtagctgtctgtactattgagaaggccaattcattagttaacagattg
ctggaagaagatagattatcagaagtcggcattattgttattgatgaactacacatggtt
gctgatcccagcaggggttatttgttggagcttctattaacaaagcttcgctatgcagct
ggtgaaggtaatggtgaggcatgtagtggtggaagttcagccacaagtagtggtaagggt
gacatagcgactggtctgcaaattgttggaatgagtgctacaatgccaaatgtggcagca
gttgcagattggcttcatgcagctttataccagactgaatttcgtccagtccccttggaa
gagtatataaaagtgggtaacaatatctttgacaaaagtatggaaatagttaggacattt
cctaagtcggcaaatcttggaggcaaagatccagaccatgttgttgaattatgcaatgag
gttgttcaagatggtcattctgtacttatattctgttctagtcggaaaggatgtgaatct
actgctaagcatatttcaatgtatcttaagaagttctcggtgaaaattcaagacgagtct
agtgaattcactgatgttttctcagccatcgatgccttgagaaggtgtcctgtgggttta
gatcctgtgttagaggaaactctcccctctggtgtcgcttatcatcatgctggcctcact
gttgaggaaagagaaattgtggaaacttgttaccgtaaaggtttggtacgtgtccttact
gcgacatccactcttgcggctggtgttaatttgcctgcaaggcgagtcatatttcgacaa
cccaagattggttgtgattttattgatgggacgaggtataaacaaatggctggcagagct
ggtcgaactggtatagatgcaaaaggagaaagtgtgcttatctgtaggcctgaagaaatc
aagagaataaaggcccttctgaatgatagttgcccgccattgcaatcttgtctttctgaa
gataaaaatggaatgactcatgctattcttgaagttgtggctagtggaattgttcaaaca
gcaaatgatattcatcgatatgtgaggtgtacgctcttaaattctacaaaaccatttgaa
gatgttgttaaatctgcgcaagattctcttaggtggttatgtcataaaaagtttcttgaa
tggaatgaacatacaaaattgtacagcgccactcctttgggacgtgcttctttcggaagt
tctctttctccagaagaatcactgattgttttggatgatctttctcgagcaagagaagga
tttgtgctagcatctgatctgcatttggtttacttggcaacacccaccaatgttgatgtt
gagcctgattgggaattgttttacgaaagatttatgcagctgtcttccatagagcagtca
gttggaaaccgcgttggaattgtagaaccatttttgatgcgaatggcacatggtgctcct
gtacgtactggaagtcattcgaggaatgctataaaaggcttgcatagccgaatagattct
cagctgggagtatcaaaatccaatgccctctcagatgaacagtctcttcgtgtgtgccgg
cgattctatgttgctcttattttgtcacgattagtgcaggaactaccagttggcgaggtt
tgtgcagccttcaaagtagcacgaggaatggttcaagcattacaagaaaatgctggaaga
tttgcgtccatggtttctttattttgtgagcgacttggttggcaagatctggaaggcttg
tttgctaaatttcaaaatcgtttttcttttggagtgagagcagagattgtagagcttact
actatcccatgtgtaaagggctctagggctagagcattatacaaaggtggcctgcgtact
cctttagcaattgctgaagcatctattactgaaatagaaaaagctctctttgaatcagta
tcttggactgcccaagcagatcaagcacagaggcgcattcagttgggaatagcaaagaag
attaaaaatggtgcaaggaaaattgtgcttgatagagctgaggaggcgagagttactgca
ttctcggcattccaatcgcttggactgactgttcctcagctctcttgtccagtcttgtta
cctaccaacgatggatctaatagcaatggatcatcgaatactggagaaaatagtaccagt
agctttgctcattataaaagacgaggaaaggatatttcaattgggagacaggaaagtgaa
gctggtccagatactaatgctggaaggtcagcaaaatgtttggatactagcctggatatt
tcaaacaaagtcaatgccttgcctattggtggaattcaagtttcttccacaccgactaaa
gatttagttccaagttcttgttcagatctgaatgaaactatgtcttgtattgaggctgta
gataaggagggtcagagattgggtgtagaaaaatctaccagtggcagaaataagctgcgt
tctaatgacaaaggtcctattaatgtagctagtgcgagcagtctggacacactcttggat
ctgtgggaatctgttggagattttcattttgatgtccacttcagcaaaaagtccgaagca
aattctttgcttgcatatgaagtacatgggttagccatttgctgggaaaattcactcgtg
tattatgtcaatcttgcaaagattttacggaatagtgattttgactcctgcaacaatgag
tgttctgggcaagtgaactcgattgatgccaacatcttgttagtcatgaaaattctccgg
tggcatagaattgttcggatactagagagaactggtgtacggaaatttacatggaactta
aaaattcaggtccaggtgctaaaaaatgctggtctttcactcaataaaaacagtttgagt
cggtcaattaatagtgccgccatcgaactcgtagacggctcattctgtaggctgcctcag
gttattctgcatgatggaattgacttgtgtgttgtagcctggatcctttggcccgaggag
gagaaaagctccaatccaagtcttgagaaggaagttaagaagcgtgtgtccagtgaggca
gcagcagcagccaatcagagtggaaggtggaaaaatcagatgcgaagagcggctcataat
ggttgctgtcgccgtgttgctcaagtacgggccttacattgtgttctttggaaattgctt
gtttctgaaggactggttgacgcgctgatgagtattgaacttcccttggttcatgtcctt
gctgatatggaagataagggaataggcgtagacatggaaggttgcttaaaggcacggaaa
ttgttgagcaaaaagcttaagattcttgagaacgaagcttacaaactcgctggcgtgact
ttttcactatatatgcccgctgatattgcaaatgtactttatgatcacttgaagctccca
atacctgaaggacgcaagaaaggaaaacaacatgtgagtacggacaaacaatgtttgaac
ttattaaggcttgaacaccctattgttccagtaattaaagaacaccggacattagcaaag
ctcctgaattgcactctaggatcaatatgttctttagcgaagttatctatgaggacacag
aggtacacattacatggtcattggctacagacgtcaacagcaacaggccgactttcgatg
gaggaacctaatcttcagtgtgttgcacatatggttgaattcagaatgcatcaaaatggt
gatccccaaggcgattctgatggtacaaatcttaaaataaatgcccgggacttttttatt
ccgactgaggaaaattggcttctcttgactgcagattattctcagatagaattacgtttg
atggctcacttctctagggacctttttctgattgaactactcagtaagtcagatggtgat
gccttttccatgatagcatccagatggacgggcaagccagaacacaatgttagttctcaa
gagcgagaacaaaccaagaggctagtatatggaattctctatggcatgggtgctaatagt
cttgctgagcagttgaactgcagtgcagatgaagctaaagagaaaattcaaagtttcaaa
aattcgttccctggtgttgcttcttggcttcatgaagctgttgcatattgccgtcaacac
ggatatgtgcaaactctcaagggtagaaaacgctttctatcaaaaataaaggttggcaac
agcaaggaaaaagctaaagctgagagacaagcagtgaattctatatgtcagggttctgcc
gccgacataatcaagatagctatgattaacctgtactctgtaattgctgggttcaataca
tgtaactccaccgatgcacttgcgacaaaattttctatgctgaaggggcactgccatatt
cttttgcagttcctttacgagcgaaggttaaggttggaaggacatggggttcattggagc
ccctcaatgtcgacgatgctggagaataaagtttctcgtacaaaatttttccatcttgat
gacattctctggaggggggactatcaaaggcgattgatgcaatggcaccaggtgaacaag
aaacatgctgaaaagctgcgagccagacatatcagttatttagtgaacaagcaacctgtg
aaaacacagctagatgcgtttcacttccatgctaaaatttgcaataaactccaaatacat
aatagcaacgggaaaatttacatatcacaaactatttttttccgaacaacctaa

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