Amaranthus tricolor (tampala): 130804651
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Entry
130804651 CDS
T09367
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130804651
Membrane trafficking [BR:
atri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130804651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
130804651
NCBI-ProteinID:
XP_057525154
LinkDB
All DBs
Position
17:12115753..12132454
Genome browser
AA seq
1454 aa
AA seq
DB search
MVSNPPFELEDQTDEDFFDKLVNDDDEDDLSSKRSGSINVPDVLDDGNESDELKSFANLS
VSEISVSNSVSDIKVVFPVGESEEQVVDREANSILESSDLPVLENGPVLEDAEVTAFEVV
SDLGRDNSSLSSNVKEVQCSPTSVKEVQWSAFTDPASGGDDDFFASLGEGGVGNLEPDAK
MVLGNEASQNATIIENSCTHSHVEYQGSTEAFTEQTANGGDTTSIEYWESLYPGWKYDVN
TGQWYQAQSGESANGQGSMGITADVQETFGITDVQPSQFSYAKQTAYSSVETVSQFSATE
NVSGWNYIMQPNGNYQYPAHMVFDPQYPGWYYDTIAQEWRSLESYHALEKSTNQISNQQA
QNGFQFSGYSHANSQGIIDDTVQNHRIEGVGKSLAMPSQDYGQQGANAEFGMASRSNTQA
SVAQSWQSSGEYNLYANSQGRQLSSDSTGPLTTHEQSIWSDNNSNWVGGLNNFSAENNFQ
LFNPTQQVHQNGSTQYPTDYYHTQYPAAVGQTSFSNGHHAPYSPSEGRSSAGRPPHSLVT
FGFGGKLVVMKDILGGFSTVGSKNSVGCSLSVHNLMEVVSLNKDPPSTNTRVCNYFHSLC
HQSFPGPLVGGNVGSKELYKWIDERIANSQTLEINHGKGQGLKLLLSLLKIACQHYGKLR
SFGGDTGLKENDLPESAVAELFASAKRNGSQFTECNDKCLMALPSEAHIQTTATEVQRLL
ISGKKLEALQRAQEGQFWGFALVLARQLGEQFYADTVKQMAASQLVFGSPLRTLCLLIAR
KPEEVFSNSSVPPSNLYSATHMSPQPVQNAGSTMLDNWEENLALITANRTENDQLVIMHL
GDCLLKEKHDVAAAHICYLIAEAGFELYSDSARICLIGADHWNFPRTYASPEAIQRTELF
EYAKVLGNSQFVLLQLQSYKLMYAHMLAEVGRVTDSLKYCQAVHKSLKIGRSPEGDTLKH
LVSNLEERIRTHQQSGYAANLAPAKIVGKLLNFFDSTAHRVVGGLPPSGPSSATTQNSFQ
GNENQFQSLGPKVTGNQSFMGAPSLSPSASMDMMSSQPTISMPSLAPSASMEPISKWAVD
GSKMTLQNRSISEPDIGRTPRSDQVDSSNEATSSGTVGKQSGSAGTSRFGRLNFGAQLLQ
KTVGLVLKPRQGRQAKLGDTNKFYYDEKLKRWVEEGAEPPPEESALPPPPTTAVFQNGKS
DYNLKTALNNGLQATDGSAGSVSSTPESSPAFPPTLSSSNQFSARGRMGVRSRYVDTFNK
GGGVSTNLFQAPSAALAKPANLTGAKFFIPSAAPKNVETSATEAGSSNEESDSGEKSSMS
MDDPLQKLAPSPMGTIQRFPSVGTIPSNGTMESGKSSLAPQFRRASWSAIHNESYTSPPT
TDIRAPPMSFMSSQNQMPGSLHMHRDNSGDESYASPPTEIRTPPMSFMSAQNLIPGSLHM
HRDNSGDDLQEVEL
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaatcctccatttgagttggaggatcagacggatgaggatttttttgataag
cttgtcaatgatgatgatgaagacgatcttagctccaaacgtagtgggtcgattaatgtc
cctgatgttttggatgatggaaatgagtctgatgaacttaaatcatttgctaatttaagc
gtaagcgagattagtgttagtaatagtgtttccgatatcaaggttgtttttcctgttgga
gaaagtgaagaacaagttgttgatagggaggctaattctatattagaatcctcagatttg
cctgttttggaaaatgggccagtgttggaggatgctgaggttactgcttttgaggtggta
tcggatttggggagggacaatagttctctttctagtaatgttaaggaggtccagtgttca
cctactagtgttaaggaggtccagtggagtgccttcactgatccagctagtggtggggat
gatgatttctttgctagtttaggagaagggggagtgggcaatcttgagcctgatgctaaa
atggtgttgggaaatgaagctagccagaatgcaactattatagagaactcatgtactcac
agtcatgttgagtatcaaggtagcacagaggcttttactgaacaaactgctaatggtggt
gatactactagtattgagtattgggagagtctttaccctggttggaaatacgatgtaaac
actgggcagtggtatcaggcacagagcggtgaatctgcaaatgggcaggggagcatgggt
atcactgctgatgtacaagaaacctttggtatcactgatgtccaaccatctcaattttca
tatgctaagcaaacggcttactcttctgttgaaactgtaagtcaatttagtgctaccgaa
aatgtgtctggttggaattatattatgcaacctaatggtaattatcagtatccggcacac
atggtttttgatccccagtaccctggatggtactatgatacaattgcccaagagtggcgt
tcattggaatcatatcatgcattagagaaatcaacaaatcaaatttctaatcagcaggct
caaaatggatttcaattctctggttattctcatgctaatagtcagggcattattgatgat
acggtacaaaatcataggattgaaggcgtggggaaaagtttggctatgccctctcaagat
tacggtcaacagggtgcaaatgctgagtttggtatggcaagtaggtctaatacccaggct
tctgtggctcagtcttggcagagctcaggtgaatacaacttgtatgctaacagtcaaggg
agacaactttcctctgattccacaggacccttaacaactcatgagcaatccatttggagt
gacaataattcaaactgggttggaggattgaacaatttttctgctgagaataactttcag
cttttcaatcctactcaacaagtacatcaaaatgggtcaactcaatacccaactgattat
taccatactcaatatccagctgcagttggccaaacatcattttctaatggccatcatgcc
ccctattcaccaagtgagggaaggtcatctgcagggcgtcctcctcattctttagttaca
ttcgggtttggggggaagcttgtagttatgaaagatattcttggagggttctctacagtt
gggagcaagaatagtgttggatgctccttatccgtacacaatttgatggaagttgtgagt
ctgaacaaagaccctcctagcaccaatacacgtgtctgtaactatttccattcattgtgt
catcaatcctttcctggtcctctagttggtggaaatgtgggaagcaaagaattgtataaa
tggattgatgagagaatagcaaactctcaaactttggaaataaatcacggtaagggtcaa
ggtttgaagttgctgctttccttgctaaaaatagcatgccagcactatggaaaacttcga
tcatttggaggggacacagggttgaaggaaaatgaccttcctgaatcagcagttgcagaa
ctttttgcttctgccaagaggaacggcagtcagtttactgaatgtaatgacaaatgcttg
atggctttgccttctgaagcacatattcagacaactgctaccgaggtacaaagacttctt
atatctggtaaaaagttggaggctttgcaacgtgctcaagaaggtcagttctggggattt
gctctagttcttgctcgacaacttggtgagcagttctatgctgacactgttaagcaaatg
gcagccagccagctagtgtttggttcgcctttgagaaccttgtgcctgctaattgccaga
aaaccagaagaagttttctccaatagcagcgtgcctcctagcaatttgtatagcgcaaca
catatgtcaccacagcctgtgcagaatgcaggttctactatgctggacaactgggaggag
aatttggctctaataactgcaaatagaactgagaatgatcagctcgtgattatgcatctt
ggagattgtctgctgaaggaaaaacatgatgttgctgctgcacatatctgctacttgatt
gcggaggctggttttgagttatattcagatagtgcaagaatatgtctcattggcgcagat
cactggaactttcccaggacttacgctagtcctgaggctattcagcgaacggagcttttt
gaatatgcaaaagtacttgggaactctcaatttgttctgcttcaacttcagtcatacaaa
cttatgtatgctcacatgctggccgaggttggaagggttacagattcgttgaaatactgt
caagctgttcacaaatccctcaaaattggccgatcaccagaaggagatacattgaaacat
ttggtatcaaatcttgaagagaggattagaacacaccaacagagtggatatgcagcaaat
ttagctccagcaaagatagtgggcaaactgctcaacttttttgatagtacagctcatcgt
gttgttggaggactcccgccttctggtccttcctctgcaacaacgcaaaatagtttccag
ggcaatgagaatcagtttcagtcactgggtcctaaggtaacaggcaatcaatccttcatg
ggtgccccatcgttgtcaccatcggcatcaatggatatgatgagcagtcaaccaacaata
agtatgccgtcactggcaccatctgcgtccatggaaccaataagcaaatgggcagtagat
ggaagtaaaatgactttgcaaaatagaagcatttcagagccagatattggtagaacacca
agatcggatcaggttgattcgtcaaatgaagcaacttcttctggcactgtgggaaaacaa
tctggttcagcaggaacatcacgctttggtcgtttgaactttggtgctcagttgttgcaa
aaaactgttggattggtcttaaaacctcgtcaaggccgccaggctaagctaggggacaca
aataaattttactatgacgaaaaactaaagagatgggtggaggaaggtgctgaaccacct
cctgaagaatctgccttgccaccaccacctacaactgcagttttccaaaatggaaaatca
gattataacttaaagactgcactaaataatggattgcaagccactgatggtagtgctgga
tctgtgagttcaactcctgagagcagtcctgctttcccacctactttgtctagttcaaat
caattttcagcgcgtggccggatgggtgtacgatcaaggtatgtggatacctttaacaag
ggtggcggtgtatccacaaatttgttccaggcaccatcagcagcattagctaaacctgct
aatttgaccggggccaagttcttcattccttctgcagcaccaaaaaatgtggagacttca
gccacagaagctggaagcagcaatgaagagtctgacagtggggaaaaatcttccatgtcc
atggatgatcctttgcagaaactagcaccctcacccatgggaacaatacagaggttccca
agtgttggtacaattcctagtaatgggacaatggaaagtgggaaaagttctcttgcgccc
caatttcgacgtgcctcttggagtgcaattcataatgaatcctatacttcgcctccaaca
acagatattagagctcccccaatgtcatttatgtcctctcagaatcaaatgccaggtagt
ctgcatatgcatagagacaattctggtgatgaatcctacgcttcacctccaacagagatt
agaactcccccgatgtcatttatgtctgcgcagaatctcataccaggtagtctgcacatg
catagagacaattctggggatgatctccaggaggttgaactttga
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