KEGG   Amaranthus tricolor (tampala): 130804778
Entry
130804778         CDS       T09367                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130804778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atri03041]
    130804778
Spliceosome [BR:atri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130804778
 Complex B
    130804778
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded PRP38_assoc
Other DBs
NCBI-GeneID: 130804778
NCBI-ProteinID: XP_057525355
LinkDB
Position
2:complement(31412106..31424266)
AA seq 569 aa
MSDYQEDPDRNGSSQQPQDPDHGGLGELNDLKSQDGSHDRARESSRSRERDREKGRERDK
DRDKERDRDRDRHRDRDRDRERDRDKERSRDRDRDHDRHRDRHKDRIDKGDRHRDREDDD
DYYRSRDRDRRRDYDRGRDERRRHRSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPTSA
MLTTAAAFTGQMPGTAPTIPGMFPNMLQLTPGQPLGSLPVMPMQAMTQQATRHARRVYVG
GLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA
LDGIIFEGTACKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGTAGGLEGPDRIFVG
GLPYYLTEVQIRELLESFGALRGFDLVKDRETGNSKGYAFCVYNDPSVTDVACAALNGIK
MGDKTLTVRRASQGAVQPKPEQEIVLQHAQQQIMLQKMMFQPGALPTKVVCLTEVVTADD
LRDDDEYQDIMIDMKEEGEKFGSLVRVVIPRPGSNGELGPGVGKVFLEYADTESSSRARA
GMNGRKFGGNQVVAVFYPENKFAECDYDG
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgtcggattatcaggaagatcctgatagaaatggttcttctcaacaacctcaagatcct
gaccatggtggccttggtgaactcaatgacttgaaatctcaggatggttctcatgatcgt
gcaagggaatcttcaagaagtagagaaagggaccgggagaagggtcgggaacgagataag
gacagggataaggaaagggaccgtgatagggataggcatagggatagagacagggatagg
gaacgagacagagacaaagagagatctcgtgatagagatcgagatcatgatcgtcataga
gataggcataaggataggattgacaaaggtgaccgccaccgagatagagaggatgatgat
gattattacagaagtagagatcgtgataggcggagagattacgatcgtggtagagatgag
agacgtagacaccgttctcgttcaaggggaagatcagagcataggtcaaggtctcgatcg
cgttctcgttctaagagcaaaaggataagtgggtttgacatggcacctccaacttctgca
atgttaaccacagctgcagcctttacgggccaaatgcctggaacagctccaacaatccct
ggaatgttcccaaacatgttacagctgactcctggacagccattaggatctcttcctgtt
atgcctatgcaggcaatgactcagcaggctactcggcatgctcgccgagtatatgttggc
gggctacctccaacagcaaacgaacagtcggtggcaaccttttttagccatgttatggct
gcaattgggggaaatactgccggaccaggtgatgctgttgtcaatgtttatataaatcat
gaaaagaagtttgcttttgtggagatgaggtctgtggaggaagctagcaatgccatggca
ttggatggcatcatatttgagggtacagcatgtaaggtgcgaaggcctagtgactataat
ccgtctcttgctgcaactctcggtcccagtcaacccaatccaaatctgaaccttgcagct
gttggactaacaccagggacggctggtggactcgagggccctgatcgtatttttgtgggt
ggactaccatactacttaactgaagtgcagattcgggagttgctagaatcttttggggcc
ctcagaggttttgatctcgtgaaggacagagaaactgggaactccaagggctatgcattt
tgtgtttacaatgatccctcggtcactgatgttgcttgtgcagctctgaatggaattaag
atgggtgataaaacactcacggttagacgtgctagtcaaggagctgttcaacccaagcct
gagcaagagattgttttgcagcatgcacaacaacagataatgttgcagaagatgatgttt
caacctggagcacttcccacgaaagttgtttgcttaactgaagttgttactgcggatgat
cttagagatgacgatgagtatcaagatataatgattgatatgaaagaagagggtgaaaag
tttggttctttggtgagggttgtcataccaagaccaggatcaaacggtgaactcggacct
ggagtcggaaaggtctttttggaatatgccgacacagagagttcctccagagcgcgagca
ggaatgaatggaaggaaatttggcggaaaccaagtagtggcagtgttttatcctgaaaat
aaatttgctgaatgtgattatgatggataa

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