KEGG   Amaranthus tricolor (tampala): 130804851
Entry
130804851         CDS       T09367                                 
Name
(RefSeq) lysine-specific demethylase JMJ17 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atri01009]
    130804851
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atri03036]
    130804851
Enzymes [BR:atri01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130804851
Protein phosphatases and associated proteins [BR:atri01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130804851
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130804851
SSDB
Motif
Pfam: PLU-1 JmjC PHD zf-C5HC2 JmjN ARID PHDvar_NSD PHD_UBR7-like KDM5_C-hel PHD_5 DUF5357 RBD_RDR6 DUF2259
Other DBs
NCBI-GeneID: 130804851
NCBI-ProteinID: XP_057525453
LinkDB
Position
17
AA seq 1850 aa
MGKGRPRAVEKGKNCASTNGSMNIDSAPVYYPTEEEFRDPLEFIYKIRVEAEPYGICKIV
PPSNWKPPFALDLNSFSFPTKTQAIHQLQVRPAGCDPKTFELEYDRFLKDQCGGRKLKRK
AIFEEEELDLCKLFNAVKRFGGYDNVAKKKKWGEVFRFVRPKTKISECAKHVLGQLYLEH
LYDYEEYYIKLSKGKLKGCKRGLHINDKKRDQRSDSGGMKKRHKINSGEAVKICKSSKEE
VHDQICEQCRSGLHGEVMLLCDRCNKGWHIYCLSPPLDSIPLGNWYCLECLNSDEDSFGF
VPGKCFSLEAFRKIADRTKKKWFGNASCSRSQLEKKFWEIVEGSLGEVEVMYGSDLDTSI
YGSGFPRLNDNIPESVDEEVWNEYCNSPWNLNNLPKLRGSMLRAVHHSIAGVMVPWLYIG
MLFSAFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEASAFEKVMRSCLPDLFDAQPDLLF
QLVTMLNPSVLQENGVPVYTVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPH
GGFGSELYKLYHKPAVLSHEELLCVAVKIGCDAEVASFMNKELLRVFSKEKVWRVQLWQK
GLVKTSIMPPKKHPDYVGTEEDPTCIICQQYLYLSAVVCRCRPSTFVCLEHWERLCECNP
RKRRLLYRYSLAELNELLVMTDNFVSGPNDYPQNKDLPGKNVCSIDSDTLKKKVKGKQIS
LAQLSEEWLLSYCKIFQEPFSSSAYVIALKEAQQFLWAGPDMDPVRDMVKNLVQAKDWAE
SIRKSLSIIESWSKNGDCHVNKVDLEHINSLVNHNVVPCNEPRHHKLKEYAEAARLLVDE
VNHVLSKSTSSMAELENLLNQTTSFPIYFKESDRLESMVSSLKVWLDGVKSCVLETKPAA
INIDFLRHLKEQMLEFPFHLPESKKLLDLIEQAELCQAQCIEMLKGSITLEKLESMIDEF
GDLVVNIPELKLLQQFHVDALSWISRFNNVLLNIDEREDQDNVVEELECLQKDGSELRVQ
VDELVFVEAEMHKARCREKALQVRKSKVTIDFVQEVLSEAAVLQIEREDMFVSLSKMVST
AISWEENSKEILEVESKLQDFEDALRASKDLFVILPSLPALKDAVSTAYSWLESSKPFLQ
PSFLTTTGSDAVLAFEDLKEQVSRSKFLKVNLVEKTLIETIMKKCEEWRCCACTSLKDVD
QMFNRRDVFNRHHSNMILDIEKLRTKVESAANTGHSLGFDFPEIPLLRNAASTLSWCSKV
LVCRVETPSLESVDSLIEEMKDLSTRYTNAFVYSSLIDAVSWLKGASEIVSASSNGGVQR
FHLSDAEDILMKSQETLVTFPELIVQLERAIENNKMWQEEVRAFFSNVQQSWHRLLQLKE
LGKDAFNCLELDMILSEYDLVEKWKQRGREVVGCSTGDVVTLLSSLLKIKQSLHRSLYIY
EKSRSWKVRFFCIGCSDNSDDQEFITCSTCKDCYHLRCLIPKSMVSNNGKSYTCPYCVLV
DSGSICRSKESPLRYKGKRPELEKLAELNSDANKFTTRLEEVDILQEILDQALACRGCLS
EIVDSSLAFLEKDVSTISGKLTIVLKALDAAGVSDSIATREFDQALARNSWRIRSSKLVE
GFQKPTMQQIQRHLKEGSAIKVPAEDYFRQKLVEVKQAGMQWAERAKKVASDNGDLELDK
VFELIAKGENLPIHFEKELKLLQTRSLLYCICRKPYDQRPMIACDECDEWYHFDCVNVVS
TPDVYICPACKPLMEGKMPLFSSVKQERSQSPRESEPQTPSPRHVESRWRPKRVKPSSKQ
KTFIASESRRSLLWSSGLDKLFWRNRKPFRRTAKKRTEFRNLSPFINLQD
NT seq 5553 nt   +upstreamnt  +downstreamnt
atggggaaaggtagacctagggcagttgaaaaagggaaaaattgtgcaagtacaaatggt
tctatgaatatagattctgctccagtttattatccaacagaggaagaatttagggatcct
ttggaatttatttataaaattagggttgaagctgagccttatgggatttgtaaaattgtt
ccaccaagcaattggaaacctccttttgctttggatttgaattcgttttcgtttcctacc
aagactcaggctattcaccagttgcaggtgaggcctgcggggtgtgatccgaaaactttt
gagttggaatatgataggtttcttaaggatcaatgcggggggaggaagttgaagaggaag
gctatttttgaagaggaggagttggatttgtgtaagttatttaatgcggttaagaggttt
ggtgggtatgataatgttgctaagaaaaagaaatggggtgaggtttttaggtttgtgaga
ccgaaaacaaagatttctgagtgtgctaagcatgttcttggtcagttgtacttggaacat
ttgtatgattatgaagagtattacattaaattaagcaaggggaaattgaagggatgcaag
agagggttgcatattaatgataagaaaagagaccaaaggtcggattcaggtgggatgaag
aaaagacataagattaatagtggggaggctgttaagatatgtaaatcatcgaaggaagag
gtgcatgatcagatatgtgaacaatgtagaagtggtttgcatggggaggttatgctttta
tgtgatcgatgtaacaaggggtggcatatttattgcctatcacctcctttggattcaatt
ccgctgggaaattggtattgtcttgaatgtctgaattctgatgaagacagttttggtttt
gttccgggaaaatgcttttctttggaagcttttagaaagattgctgatcggaccaagaaa
aagtggtttggaaatgcttcatgctcaagatctcaattagagaaaaagttttgggaaatt
gtagagggatcattaggtgaggttgaagtcatgtatggtagcgatttagatacgtctatt
tatggaagcgggtttccacgtttaaatgacaacataccggaatcagttgatgaagaagtg
tggaatgaatattgtaatagcccttggaatctcaataatttgccaaagttgaggggttca
atgcttcgggcagttcatcacagtattgctggtgttatggttccttggctgtatattggt
atgctcttttctgcattctgttggcattttgaagatcactgcttctattcgatgaactac
catcactggggagaacctaagtgctggtacagcgttcctggtagtgaagcctctgcgttt
gagaaggttatgcgtagctgcttgcctgatctctttgatgcacaaccagatttgctcttc
cagcttgtcacaatgttgaacccctctgttttacaagaaaatggagttcctgtttatact
gttctgcaggaaccaggaaattttgtgattacctttcctagatcttatcatggaggtttc
aatcttggattgaactgtgctgaagctgttaattttgctcctgctgactggttacctcat
ggagggtttgggtcagagctctacaagctgtaccataagcctgctgtactttctcatgag
gagctgctttgtgtggctgtgaagattggttgtgatgctgaggtagcttcgtttatgaac
aaagagttgctgagagtgttttccaaggaaaaggtttggagagtacagctttggcagaag
ggccttgtcaaaacatctataatgccacccaagaagcatcctgattacgttgggactgag
gaagatcccacttgcataatctgccagcaatatttgtatctttcagctgtagtttgtcgc
tgcagaccatctacttttgtgtgcttggagcactgggaacgtctttgtgaatgtaatcca
aggaaacggcgcctcctatatcgctactctttagctgaattgaatgagctgttagtcatg
acagataattttgtttctggtcctaatgactatcctcaaaataaggatttgcctgggaag
aacgtatgctccattgactcggacactttgaaaaagaaggtgaagggtaaacaaatatct
cttgctcaactttctgaagagtggttgttgagctattgtaagatttttcaggagcctttt
tcctctagtgcatatgtcattgcattgaaggaagcccaacagttcctttgggctggtcct
gatatggatccggtgcgagatatggtgaagaatttggttcaagcgaaggattgggcggag
agcataagaaagtctctctcaattattgagagttggtctaagaatggtgattgtcatgtg
aataaagtggatcttgaacacattaacagcttggtgaatcataatgttgttccatgtaat
gagcctagacatcataaactaaaggagtatgctgaagcagccaggctgttggtggatgaa
gtaaaccatgttctttcaaaatcgacatcatctatggctgagttagagaacttgctcaac
caaactaccagcttcccaatctacttcaaagaaagtgacaggttggaaagtatggtttct
tctctgaaggtttggcttgatggagttaaaagttgtgttttagagacaaaacctgctgca
attaatattgattttcttcgccatctgaaagaacagatgttggagtttccatttcatttg
cccgaaagcaaaaagcttttggacttaattgagcaagctgaactgtgtcaggcccagtgc
attgaaatgctgaaaggttccataactctggagaagcttgagtctatgattgatgagttt
ggggatcttgtcgtcaacattccagagttaaaactactacaacagtttcatgttgatgct
ctttcatggatttctcgttttaataatgtactgttaaacattgatgaacgggaggatcaa
gataatgtcgtagaagaactagaatgccttcaaaaagatggctctgaattgagagttcaa
gttgatgagttggtttttgttgaggctgaaatgcacaaggcacgttgccgagaaaaggcg
ctgcaggttcgtaaaagtaaagtgacaatagattttgtccaagaggtgttgtctgaagct
gcagtattacaaattgaaagggaagatatgtttgtttcgctatccaaaatggtatctacg
gccatttcttgggaagaaaattccaaagagattctggaagttgagtcgaagttgcaggat
tttgaggatgctttaagggcctcaaaggatttgtttgtgatcctgccttcccttcctgct
ttgaaggatgctgtatctactgcttattcctggttagaaagttcgaaaccgtttttgcag
ccttcttttttaactacaacgggttcagatgctgttctagcgtttgaggatctcaaggag
caagtgtcgcggtcgaagttcttgaaagtaaacttagtggaaaaaacgttgattgaaact
attatgaagaagtgtgaggaatggagatgctgtgcttgcacttctttgaaggatgttgat
caaatgttcaatagaagggatgtgttcaatagacatcatagtaatatgatattggacatt
gagaagctaagaaccaaggttgaaagtgctgcaaacactggccattctctggggtttgac
tttcctgaaattccactgctgcggaatgctgcttctaccttgagttggtgctccaaggtc
cttgtatgtcgcgttgaaactccttcacttgagagtgttgacagcttgattgaagaaatg
aaagacctttcaacgcgatacaccaatgcttttgtctacagttctttgattgatgcagtt
tcttggcttaaaggggcctctgaaatagtatcagcgtcgagcaatggtggagtacaacgt
ttccatttgtctgatgctgaagatatccttatgaaatctcaggaaacactggtcaccttc
ccagaattgattgtccaacttgagcgtgcaattgaaaacaacaaaatgtggcaagaagaa
gtgcgagctttctttagtaatgttcagcagtcttggcacagattgttacaacttaaggaa
ttgggaaaggatgctttcaactgtctagagctagacatgatcttgtctgaatatgatctt
gtagaaaaatggaagcaacgaggaagggaggttgttggttgttcaactggggatgtggtg
acactgttaagttctcttttgaagatcaagcaatcattacatagatctttgtatatctat
gagaagtcaagaagctggaaagtgagatttttttgcattggatgctctgataactctgat
gaccaagagtttatcacttgttcaacatgcaaggattgctatcatcttagatgcttaata
cccaagtccatggttagtaacaatggaaagagctatacctgtccctattgtgtattagtt
gacagtggttcaatatgtcggagtaaagaaagccctctgagatataaaggaaagcgtcca
gaattggagaagcttgctgaactgaattctgatgctaataaatttactacaaggcttgaa
gaagtggacatattgcaagaaattctcgatcaagctctagcatgtagaggctgcttgtca
gaaattgtggattcttcactggctttcttggagaaagatgtctcaaccatctctggaaaa
ttgactattgttttgaaggcattagatgcggctggagtgagtgattcgatcgcaactcgt
gagtttgatcaagcacttgctcgaaattcatggagaattagatcttctaaattggttgag
ggtttccagaagcctactatgcaacagattcaacgccatttgaaagagggatcagctatt
aaagtcccggcagaagattacttcaggcagaagcttgtagaggtgaagcaagctggaatg
cagtgggccgaaagggccaagaaggttgctagtgataatggtgatttagagctggataaa
gtgttcgagctcatagccaaaggggagaatttgcctatccactttgagaaggagctaaag
ttgttgcaaacaagaagcttgctatactgcatttgtcggaagccatatgatcagaggcca
atgatcgcatgtgatgagtgtgatgagtggtatcattttgattgtgtcaatgtggtgtct
acaccagatgtctacatctgtccagcttgtaaacctcttatggaagggaaaatgcctctg
ttctcatctgttaaacaagagagatcccagagtccacgagaaagtgagccgcaaacacct
tcgcctcgacacgtagagtcaagatggaggcctaagagggtgaaaccatcgtcgaagcag
aagacattcatagcttccgaaagtcgtaggagtttattgtggtctagtggattagacaag
ttattttggagaaataggaaaccatttagaagaacagcgaagaaaaggaccgagtttaga
aacctgtcaccattcattaatttacaagattag

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