Amaranthus tricolor (tampala): 130805011
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Entry
130805011 CDS
T09367
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130805011
04121 Ubiquitin system [BR:
atri04121
]
130805011
Transcription factors [BR:
atri03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130805011
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
130805011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
130805011
NCBI-ProteinID:
XP_057525594
LinkDB
All DBs
Position
2:complement(3385722..3390407)
Genome browser
AA seq
1163 aa
AA seq
DB search
MTFQAQNERRDRSSFSGQSGRQQWVARSPGILSSQPSRFNENPDGYAGDGNSRPGQIDGR
WGRGFRRGGSGVVIGRSQPLGFNENPDVNAGDMNGRPGQIDGRGDRVFRGGDSGVSGRGG
RSFMGRPEHLRRDRNKMREGFGERGNVNRDRSNDQRKGGGKGGDFSDLPQLVQEIQDKLR
KGTVECMICYDMVRRTAPIWSCSSCYSIFHLNCIKKWARAPSSVDTSAEKSQGFNWRCPG
CQAVQLTISKDIRYVCFCGKSHDPQSDSYLTPHSCGEPCGKPLERDVLKPGLSKEDMCPH
VCVLQCHPGPCPPCKAFAPRRPCPCGKEVITTRCSERKSVHTCGQVCDKVLECGRHRCDE
ICHVGPCEPCQIPMDASCFCKMKSETVICGDMSLNGEITPENGVFSCSSSCGKKLSCGNH
DCVEICHPGPCGECELLPSKVKTCYCGKTNITDQRRSCLDPIPTCSGTCGKLLPCGKHYC
KDKCHSESCSCCSELVTQKCRCGSTSRTVECYKTTLASEEFVCDRPCGRKKNCGRHRCSE
RCCPLSDSSNTVSGEWNPHFCSMPCGKKLKCGQHSCEAFCHCGHCPPCMETIFTDLTCAC
GRSSIPPPLPCGTLPPLCQYPCSVPQPCGHQSTHSCHFGDCPPCSVPIAKECIGGHVVLR
NIPCGSKNITCNKLCGKTRRCGLHACARSCHPSSCDPPNGPSDPAAKGSCGQVCGAPRRD
CRHTCQALCHPSAPCPDLRCESPVTISCSCGRITVTVPCDAGGSISTTFNASNVYEASIM
QKLPAPLQPVEASEKIIPLGQRKLTCDDECLKLEKKRILADAFDISPPNLDALHFGENPA
VSQVLSELLRRDPKWVLAVEDRCKHLVLGKSKGGSSNIKVHVFCPMIKEKQDAIRFIGDR
WKLTISAAGREPKRFIVVHATAKSKAPPRILGPKGSAAVAAQHPPVFDPHVDMDPRLVVA
LLDLPSDAYISTLVLRFGGECELVWLNDKNALAIFSEAARAATAMRRLDNGSVYQGAAVV
QHNGAGISAPSAWGGTAASALRSNPWKKAVVKDANSWFEDSWGAEEWTNGNASADVGSTS
SWKKPEASATTTTTNRWTILNSDSFSRSTESSVRPVDNSQRTVAAESSSGTGSEIKTTNT
ATVQLMGLPEDSEVVDDWETAFE
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcaagctcagaatgaacgaagagatcgttcttcattttctggccaaagtggt
cgtcagcagtgggttgctagaagtcctggaattttgagttcccagccatcacgttttaat
gaaaacccggatggatatgcaggtgatgggaatagtaggccgggacaaattgatggtagg
tggggtcgagggtttagaagaggtggtagtggtgttgttattggaaggtcacagccattg
ggttttaacgaaaaccccgatgtaaatgctggtgatatgaatggtagaccggggcaaatt
gatggtaggggggatcgggtgtttagaggaggagatagtggtgttagtggaagaggtggt
cggagttttatgggtcggcctgagcatttaaggagagatcgaaataaaatgagagagggg
ttcggagagagagggaatgtgaatagggatagaagtaatgatcaaaggaaagggggagga
aaaggtggggatttttcggatttgcctcagttggtgcaggaaattcaggacaagttacgt
aaaggaactgtggaatgtatgatttgttatgatatggtgaggaggactgctcctatttgg
tcttgctcgagctgttactcgatttttcatttgaattgtatcaagaaatgggctcgtgca
ccttcatccgttgatacttctgctgagaagagtcaggggtttaattggcggtgtcctgga
tgtcaggcagtgcagcttacaatatcgaaggatatccgttatgtttgcttttgtgggaaa
agccatgatccgcagtcagattcgtacttgactcctcattcttgcggtgagccttgtggg
aagccattggagagggatgttctgaaacctggtttgagcaaggaggatatgtgtcctcat
gtgtgtgtgttgcaatgccatcccggtccctgtcccccgtgcaaagcttttgcacctcgt
cggccttgtccttgtggtaaggaagttattacaacaagatgttctgaacggaagtctgtg
catacatgtggtcaggtctgtgataaggttctcgaatgtgggcgccatcgctgtgatgaa
atctgtcatgtgggtccatgtgagccttgccaaattcccatggatgcctcttgcttctgc
aagatgaagtctgagacggttatttgcggagatatgtcattgaatggagagataactcca
gaaaatggcgttttttcttgtagttcttcatgtgggaagaaattaagttgtggaaatcat
gattgtgtcgaaatctgccatccgggtccttgtggggagtgtgaattgttgcctagcaaa
gtgaagacttgttattgtggtaaaacaaatataacggatcagcgaaggagttgtctagat
ccgatcccaacatgttcgggtacttgtgggaagctgcttccatgtggaaagcattattgt
aaagataagtgtcattctgaatcttgttcttgttgctctgagcttgtcactcaaaaatgc
cgttgtgggtcaacttctcgaacagtggaatgctataagaccactctagctagtgaggag
tttgtctgtgatcggccttgtgggcgtaagaagaattgtggaaggcatcgttgcagtgag
cgctgctgccctctttctgattctagtaacactgtatccggtgaatggaacccacacttt
tgctctatgccttgtggaaagaagttgaaatgcgggcaacattcgtgtgaagcattctgt
cattgtggccactgccctccatgcatggaaactatatttactgaccttacatgtgcttgt
ggaaggtcttcaatcccgccaccactaccatgtggaaccctgcctcctctatgccaatat
ccatgctcagttcctcagccttgtggccatcaatctactcactcctgccattttggggat
tgcccgccatgttctgtcccgattgcgaaggaatgcattggtggtcatgtggtgctccgc
aacattccttgtgggtcaaagaacataacttgtaacaaactttgcggaaagacgagacga
tgtggactgcacgcgtgtgctaggagttgtcatccgtcatcctgtgatccacctaatggc
ccatcagatcctgctgcaaagggttcttgtgggcaagtatgcggtgccccaaggagagac
tgtagacacacttgccaagcgctttgccatccttcggctccttgtcccgacttaagatgt
gaatcgccagtgacaatttcatgctcttgtgggcgaattactgtaacagtgccttgtgat
gctgggggaagcatttcgacgacctttaatgcttctaatgtttatgaagcttctattatg
cagaaacttccagcaccacttcaacctgtggaagcaagtgaaaaaataattccactaggt
cagaggaagcttacgtgtgacgatgaatgtctcaagctcgagaagaaacgtattcttgct
gatgcttttgatatttctccgcctaatctggatgccctccattttggcgagaatccggct
gtttcacaagtactatctgaattacttcgacgtgatccaaaatgggtccttgcagtggaa
gatagatgtaagcacttagtacttggaaaaagcaaaggaggcagtagcaacattaaagtt
cacgtcttctgtccgatgattaaggagaagcaagatgcgattcggtttataggtgacaga
tggaaactcactattagtgctgctggtcgggagcctaagcgcttcattgtggttcatgct
accgcaaaatccaaagccccgcctcgtattttgggaccaaagggttccgctgctgtggct
gcacaacatccacctgtttttgaccctcatgtggatatggatcctaggcttgttgttgcc
ctgcttgatctcccgagtgatgcatacatcagcacattggttttacggtttggcggtgaa
tgcgaactcgtgtggttaaacgacaagaatgcccttgctattttcagtgaagctgctcga
gcagcaactgccatgagaagattagataacggatcggtttatcaaggagctgccgtcgtt
caacataatggtgctggaatttctgcaccatctgcatggggagggactgcggcttctgct
ctgagaagtaacccctggaagaaggccgttgtgaaggatgctaatagctggtttgaagat
tcatggggtgcggaggaatggactaatggtaatgcaagtgcggatgtgggttcgacatca
tcttggaaaaaacccgaggcttcagctacaaccacaacaacgaacagatggactatcctg
aattccgattccttctcaagatcaacagagtcatcggtgagacctgttgacaactctcaa
agaactgtggccgctgaaagctcctctggaactggatctgaaatcaagactacaaatact
gcaactgttcaacttatgggcttgcctgaggacagtgaagttgtggacgattgggaaacg
gcttttgagtga
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