Amaranthus tricolor (tampala): 130805189
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Entry
130805189 CDS
T09367
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130805189
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130805189
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130805189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-C3HC4
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130805189
NCBI-ProteinID:
XP_057525840
LinkDB
All DBs
Position
1:complement(14498899..14517808)
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AA seq
565 aa
AA seq
DB search
MGGRTRNGVKCNLGFAVKAFLCLLVGFTLYEPATSLRPLRERASSWGDEWLFVKKEDSNM
ASFSSWNISGTYRGTWKFSESANISARFPDFKRSDGNSIIELMSTPTKITGVHYVQGLII
FHDAFEDDHEGGGAQIRVEGVYIWPFRQLRMVANSGKDGELGPEEDYLLSNPYHLLGVFS
SQVFQDSSRDKIWRRKNSQVHDIEKHCNIEIAAQVSRVASLQNDGDHDRYHIEGLMESPS
ADEDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAK
VSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAS
RPANSGEGWEAMRRELSLLYSRFYGILLGGILIMYEFHNFLRLILLLMYSFWIPQIITNV
IRDSRKPLHPHYILGMTVTRLAIPLYIFGCPNNFMRISPDTNWCICLCSFMGLQSFVLLL
QHYLGSRCFIPRQILPEKYSYYRRFDQDGHRTTDCVICMTSIDLSEHSNDCMVTPCDHFF
HSGCLQRWMDIKMECPTCRRSLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagaacaagaaatggggtcaaatgcaatttagggtttgctgttaaagctttt
ctgtgtttgttggtgggttttacactttatgaaccggcgacaagtttaagaccattgaga
gaaagagctagctcttggggcgatgagtggctttttgtcaaaaaagaagatagtaatatg
gcttccttttcaagttggaacataagcggaacgtatcgaggtacttggaagttttcagaa
tctgcaaatatatctgctagatttccagattttaagagatcagatgggaactcgataatt
gagttgatgagtaccccaacaaaaataactggtgtacattatgttcagggcctaattata
tttcacgatgcttttgaggatgatcatgaaggaggtggtgctcaaatccgtgttgaaggt
gtatatatctggccttttaggcaactaagaatggtggcaaacagtggaaaagatggtgag
cttggtccagaagaagactacctattgtctaatccatatcacttgcttggagttttttcg
tcacaagtgttccaagattcttcacgtgataaaatttggagaagaaaaaactcacaagtt
cacgatatagagaaacattgcaatattgaaattgcagctcaagtttcacgtgtggcatcc
ttgcaaaatgatggagatcatgatcgctatcacatagagggattgatggaatctccatct
gctgatgaagatggtgactgcttttctccgttattgctcaatgcgacctctgtcaatata
gaagtctattacaacaaagctgtgaactatacactgatggttacctttgtatcctttctt
caagttcttctattgattcgacaaatggaacatagcaatacccaatctggtgctgccaaa
gtttcaatattgatgattggtcaacaggctatcatggatgcatatctctgtcttctacat
ttgacagctggaatattagtagaatcactgttcaatgcttttgcaactgctgccttcttc
aagtttgttgtgttctctatatttgagatgagatatctcttagctatatggaaagcaagt
aggccggctaacagtggggaaggctgggaagccatgagacgtgaactatcacttctttac
agccgattctatggtatactcttgggaggcattctgataatgtatgagttccataatttt
ctgcggctaattcttcttcttatgtactctttctggatacctcaaataattaccaacgtt
attcgtgattcaagaaaaccgcttcaccctcattacattttaggcatgactgttactcga
ttagcaattccattgtacatttttggctgccctaacaacttcatgcgaatttcacctgat
acgaactggtgtatatgtttgtgctcattcatgggacttcagtcttttgtcctcctactc
cagcactaccttggatcacgatgttttatacctcgtcagatcttacctgagaagtatagt
tattatagacggttcgatcaagatggacaccgtacaacagattgtgtcatttgcatgact
tccattgatctatctgaacactctaatgactgcatggtgacaccttgtgatcatttcttc
cattctggatgtttacaaagatggatggacatcaagatggaatgtccaacatgtcgccga
tccttgccacctgcttaa
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