KEGG   Amaranthus tricolor (tampala): 130805248
Entry
130805248         CDS       T09367                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03083  Polycomb repressive complex
atri04120  Ubiquitin mediated proteolysis
atri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130805248
   04120 Ubiquitin mediated proteolysis
    130805248
  09126 Chromosome
   03083 Polycomb repressive complex
    130805248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130805248
   04121 Ubiquitin system [BR:atri04121]
    130805248
   03036 Chromosome and associated proteins [BR:atri03036]
    130805248
Membrane trafficking [BR:atri04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    130805248
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     130805248
   Cul7 complex
     130805248
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     130805248
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     130805248
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 130805248
NCBI-ProteinID: XP_057525916
LinkDB
Position
2:31225902..31231368
AA seq 163 aa
MADSENKITLRSNDGETFEIDQAVAMESITIKNMIEDDCASTAIPLPNVTGKILSKVLEY
CKKHVDAAAAKSSSEERSSNAIDDELKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLT
CQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 492 nt   +upstreamnt  +downstreamnt
atggctgattctgagaacaaaataacccttagatctaacgatggcgagactttcgagatt
gatcaagcagttgcaatggaatccataacaatcaaaaacatgatcgaagatgattgtgcc
agtaccgcaattcctcttccgaatgtaactgggaagatcctatcgaaggttctggaatat
tgcaaaaagcatgtggatgctgctgctgcaaaatcttcttctgaagaaagatcttcaaat
gctatcgatgatgaacttaagacttgggatgcggagtttgttaaagttgatcaaaatacc
ctcttcgatctcatcttggctgctaactacctgaacattaagagtctgctggacttgacc
tgccaaacagttgctgacatgattaaaggaaaaacccccgaggaaatcagaaagacattc
aacatcaaaaatgacttcaccccagaggaggaagaggaggttaggcgtgagaaccagtgg
gctttcgaatga

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