Amaranthus tricolor (tampala): 130805329
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Entry
130805329 CDS
T09367
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130805329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130805329
Membrane trafficking [BR:
atri04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130805329
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130805329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR75_2nd
WD40_like
Beta-prop_Nup120_160
TPR_8
TPR_GEMI5
WD_LRWD1
TPR_2
Clathrin
TPR_1
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
130805329
NCBI-ProteinID:
XP_057526053
LinkDB
All DBs
Position
2:35453483..35464421
Genome browser
AA seq
907 aa
AA seq
DB search
MPLRLNIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVVIWDYQSQTMAKSFEACELPV
RSAKFIPRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHVKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKMG
REIPVASMDNSGKIIWAKHNEIQTVDIRRVGAGYEVTDGERLPLAVKELGSCDLYPQYLK
HNPNGRFVVVCGDGEYIIYTAVAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWADCRFIRRIDVNVKNLYWADSGDLVAI
ASDSSFYILKYNRDVVSSHLDSGRPIDEQGVEDAFELLHETNERVRTGIWVGDCFLYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVIGYTLLLSLIEYKTLVM
RGDFERANVILPTIPKEQHNSVARFLESRGMVAEALEVATDPDYRFELAIQLGKLEAAKE
IATELQSESKWKQLGELAMSTGKFEMAEECLKHAMDFSGMLLLYSSIGDAEGIAKLASQA
KEHGKNNVAFLCLFMLGKREECIQLLVDSNRIPEAALMARSYLPSKVSEIVALWRKDLNK
VNPKAAESLADPEEYPNLFDDWQIALAVESKVAETRGNFPPAEQYLQYAEKSKTDLVEAF
KSMQIEEDQPLENGDTDTVHVDTKLHVDENGEDEGQEEGVVVDADSNDGAVLVNGNETEE
WVLTQHP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcgtctcaatattaagaggaaacttgctcaaagatcggagagggtaaagtct
gtggatctgcatcctacagagccatggattttagcgagtctttattctggaactgttgtt
atttgggactaccaatcacaaaccatggcaaagtcttttgaagcttgcgaattaccggtt
agatccgcaaagtttattccccggaaacaatgggttgttgctggggcagatgacatgttt
atacgtgtgtacaattacaatactatggataaagtaaaagtatttgaagcacatactgat
tatattaggtgtgtagctgtgcatcccacactcccgtatgtgctttcatcatctgatgat
atgcttattaagctatgggattgggaaaagggttggatatgcactcaaatatttgaaggg
cattcccactatgtgatgcaagtcaccttcaaccccaaggacacaaacacctttgctagt
gcctcccttgaccgcaccataaagatatggaatctgggctcacctgatccaaattttact
ttggacgctcatgttaaaggggtaaattgtgttgactactttactggcggtgacaaacct
tacttgattactggttccgatgaccatacggccaaggtctgggactatcagacaaaaagc
tgtgttcaaactctggaagggcacacacataatgtttctgctgtgtgctttcatcctgaa
cttcccataattataactggttctgaggatggaacagttcgtatatggcattccactaca
tacaggctagagaatactttaaactatggtcttgaaagggtttgggctataggatacatg
aagggttcccgtcgcgttgtgataggatatgacgaagggaccatcatggttaagatgggt
cgtgaaatacctgttgctagtatggataatagtggaaaaataatttgggccaagcataac
gagatccaaactgtggatatcaggcgtgttggtgctggttacgaggtgacagatggtgaa
aggttgccattggcagtcaaggagttgggttcctgtgatctttacccacagtacttaaag
cacaacccaaatgggaggtttgttgtggtttgtggagatggagagtacatcatatatact
gctgttgcttggaggaataggtcttttggttcagcattggagtttgtctggtcatctgat
ggagaatatgctgttagagaaagcacttccaagatcaagattttcagcaaaaacttccag
gagaagaagagtatcagaccaactttttctgcagagcggatttatggtggaactttgttg
gctatgtgttctaatgatttcatttgcttctatgactgggctgactgcagatttattcga
aggattgatgtcaatgttaaaaatctctactgggctgatagcggtgatttggtagctatt
gctagcgactcatctttctacatcctcaagtataatcgtgatgttgtgtcttcccacctg
gatagtggaaggccgattgatgaacaaggtgtggaggatgcctttgagcttctacatgaa
acaaatgaacgtgtgaggacaggaatatgggttggagattgtttcctatacaataattcc
tcctggaggcttaattactgtgttggtggtgaggtaacgacaatgtttcacttggaccgt
ccaatgtacctattgggctaccttgcaagtcaaagtcgtgtatatcttattgacaaagaa
ttcaatgtgataggatacacattactccttagcttgattgaatacaagactcttgtaatg
cgtggggattttgaacgtgccaatgtaattttgcctacaattccaaaggagcaacataat
agtgtggcccgtttccttgaatcacgtggtatggtcgcagaggctcttgaagtggcaact
gaccctgattataggtttgagcttgccattcagcttggcaaattagaagctgcgaaggag
atagctacagaacttcaaagtgagtcaaagtggaagcagttgggagaattggccatgtcg
acaggaaagtttgaaatggcagaggagtgcctgaagcatgcaatggattttagtggcatg
ttgctgctttattcttcaatcggagatgctgagggaatcgcaaaacttgcttcccaagct
aaagagcatggaaaaaacaatgttgctttcctatgcttgttcatgttgggtaagcgggaa
gaatgtattcagctattggtagacagtaaccgaatacccgaggctgctttgatggcacgt
tcttatcttcctagtaaagtttcagaaattgttgcattatggagaaaggatttgaacaag
gttaatccaaaggctgcagaatctttggcagatcctgaggagtatcctaatttgtttgat
gattggcaaattgctcttgctgttgagtccaaagttgctgaaacaagaggcaactttcct
cctgctgagcaatatttgcaatatgctgagaaatcaaaaaccgatcttgttgaagctttt
aagagcatgcagatagaggaagatcaacctcttgaaaatggagacacggacacagtacac
gtagataccaagctgcatgttgacgagaatggagaggatgaaggtcaagaagagggtgtt
gttgtagatgctgattctaacgatggtgctgtgctcgtcaatggtaacgaaactgaagaa
tgggtgcttactcaacatccataa
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