Amaranthus tricolor (tampala): 130805337
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Entry
130805337 CDS
T09367
Name
(RefSeq) cysteine protease ATG4
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130805337
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130805337
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130805337
03029 Mitochondrial biogenesis [BR:
atri03029
]
130805337
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
130805337
Membrane trafficking [BR:
atri04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130805337
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130805337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
130805337
NCBI-ProteinID:
XP_057526075
LinkDB
All DBs
Position
2:9071426..9083617
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AA seq
486 aa
AA seq
DB search
MKNLFERTGTDKSSSSTSSSSIFPKFKHDHKLSSSPRASSFLSGIFVSTFSVFESRAEEG
VNSNSNSPKKGIITNAKISCTGSNGWAAAVKRVMASGSIRRIKENMFGFCKSSVISSTSN
IWMLGVCYKLDDAIGGDPVTSNGFAAFVEDFSSRILMTYRKGFDPIGDSKYTSDVNWGCM
LRSSQMLFAQALIVHRFGRSWRKNVNKQVEQGYLEILHEFGDFEESAFSINKLLEAGEGY
GLAAGSWVGPYAMCRAWETLVRAEKVKINKLLPMAVYIVSGDEDGERGGAPVVCIEDVYS
CCHEHSGGAADWMPILLLVPLVLGLDKLNPRYVPLLGATFTFPQSLGILGGKPGVSTYIV
GVQDENAFYLDPHEVQPVVNIMKDQAEVDTSSFHSNVIRQIHLESIDPSLAIGFYCRDKD
DFDDFCSRASSLANESNGAPLFTVTKSRNTPRTSNQCGIDETREDDSYDIVHSSNDDTHE
DEWQLL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttgtttgagagaactggtactgataaatcgtcgtctagtactagttcctct
tcaattttccctaaatttaaacacgatcacaaattatcatcatcacctagggcttcttcg
tttttgtctgggatttttgtatcaacattctcagtttttgaatctcgtgctgaggaagga
gtaaattcgaattcgaattctccgaaaaagggaattataactaacgccaaaattagttgt
actggtagtaatgggtgggcagctgccgtaaaaagagttatggcaagcgggtcaataaga
aggattaaagagaatatgttcgggttttgtaagtcgagtgttatttcctcaacaagtaac
atttggatgttgggggtttgttataaactcgatgatgctattggcggtgatcctgttact
agcaatggttttgctgcgtttgttgaggacttctcctcgaggattttgatgacatatagg
aaagggtttgatcctattggggattcaaagtatactagcgatgttaattggggatgcatg
cttcggagcagtcagatgcttttcgcacaagcattgattgttcatcgatttgggagatct
tggaggaaaaatgtgaataagcaagttgaacaagggtaccttgaaatcctacacgaattt
ggtgattttgaagaatcagctttttcaatcaataagcttctagaagctggggagggttat
ggtctagctgctgggtcatgggttggcccttatgccatgtgtcgtgcttgggaaactcta
gttcgtgctgagaaagtgaaaatcaataaattactaccaatggctgtctatattgtctct
ggtgatgaagatggtgaacgtggtggagcacctgttgtttgcatagaagatgtatatagt
tgctgtcatgagcattcaggtggtgcagctgattggatgccaattcttttgctggtccct
ctagttcttgggcttgataagcttaaccccaggtatgttcctctactgggggctacattt
acatttccccagagccttggcatcttaggcgggaagcctggtgtttcaacttacatcgtt
ggtgtgcaagatgaaaatgcattctacttggatccacatgaagttcaaccggtggttaat
attatgaaggaccaggcagaggtagatacttcgtcattccatagcaatgtgatccggcaa
attcatttggagtctattgatccttcattggcaattggattttattgcagagacaaagat
gattttgatgatttttgttcacgagcttcatcgttagccaatgaatcaaatggtgctcca
ctatttactgtaactaagagccgtaacactcctaggacatcaaaccagtgtggtattgat
gaaacccgagaagatgattcttatgacatagtgcattcaagtaatgatgatacgcacgag
gatgaatggcaacttctctga
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