Amaranthus tricolor (tampala): 130805358
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Entry
130805358 CDS
T09367
Name
(RefSeq) long chain base biosynthesis protein 1-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00600
Sphingolipid metabolism
atri01100
Metabolic pathways
Module
atri_M00094
Ceramide biosynthesis
atri_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
130805358
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atri01007
]
130805358
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
130805358
Amino acid related enzymes [BR:
atri01007
]
Aminotransferase (transaminase)
Class II
130805358
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
130805358
NCBI-ProteinID:
XP_057526109
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Position
2:38881587..38891057
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AA seq
477 aa
AA seq
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MEAAITSLLQTSVDWVTRAFEVPFARAHVFGVQIGGHLFVEGLLFVVIVYLLTQKSYAPP
KRPLTKKEIDELCEEWTPEPLIPAITKEMQREPPKLESAAGPHTIINGKEVVNFASANYL
GLIGHEKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCESRIAKFLGTPDSILYSYGLS
TMFSTIPAFCKKGDIIVVDEGVHWGIQNGLHLSRSKIMYFKHNDMKSLESILEKITIANK
RAKQIRRYIVIEGVYQNSGQIAPLDEIINLKEKYRFRLLMDESNSFGALGGSGRGLTEYY
GIPAEKIDIITAAMGHALAAEGGFCTGNSRVIEHQRLSSSGYVFSASLPPYLASAAISAI
DILEENPNLIKKLKENVAILWAGLSDLQGFEITSNPHSPIVFLKLVNSTGSLKNDMQLLE
DIIYQLLEEHNVFVVSSKRSTLDKCPLPLGIRLFVSAGHSESDLKKICDALKVVVPF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagctatcacaagcttgctgcaaacttctgtagattgggtgacaagggctttt
gaagttccgtttgctcgtgctcatgtctttggggtgcaaattgggggtcatctgtttgtc
gaaggtcttctctttgtggtcattgtctatttgcttactcagaaaagttatgcgccccca
aagagaccgttgacaaagaaggaaatcgatgagctatgtgaggaatggactcctgaaccc
cttattccagctattacaaaagaaatgcagcgtgaacctccgaaattagaaagtgctgca
ggcccacacacaataatcaatggcaaggaagttgtgaattttgcatctgctaattatcta
ggattaattggacatgaaaaattacttgattcttgtacgtctgcattagagaaatatgga
gttggttcttgtggtcctcgtggtttctatggaactatagatgtgcacctggactgtgag
tctagaattgcaaagtttttgggaactccagactcaatactttactcttacggcctttcc
actatgtttagcacaattccagcattttgcaagaaaggcgatattattgttgtggacgaa
ggtgttcattggggcattcaaaacggactccatttgtcaagaagtaaaattatgtatttt
aaacacaatgatatgaaatccctagaaagcatattggagaagataactattgccaacaaa
cgggcaaaacagatacggcgttacattgtaattgaaggagtttatcagaattctggtcaa
attgctccattagatgagattattaatctaaaagaaaaatatcggttccgccttttgatg
gacgagagcaactcatttggtgctcttggtggttctggaagaggtcttacggaatattat
ggaattcctgctgagaagattgatatcataacagctgcaatgggtcatgcactagctgca
gaaggaggattctgtactggaaattcaagagtcattgagcaccagcggctaagcagctct
ggttatgtcttttctgcttctttacctccatacctagctagtgctgcaatctctgctatt
gacattcttgaagaaaatcctaatttgattaagaagttgaaggaaaatgtagcaatatta
tgggctggtttgtcggatctccaaggctttgaaattacaagcaaccctcattctcctata
gttttccttaaactggtaaattccacaggctctttaaagaatgacatgcagttgcttgaa
gacatcatttatcagcttttagaggagcataatgtctttgttgtaagttcgaagcgttca
acacttgataaatgtcctctacctctcggaataagattgtttgtatcggccggacattct
gaatctgacctgaagaaaatctgtgatgcattgaaagttgttgtgccattctga
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