Amaranthus tricolor (tampala): 130805391
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Entry
130805391 CDS
T09367
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130805391
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130805391
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
130805391
NCBI-ProteinID:
XP_057526147
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All DBs
Position
2:complement(2616341..2628311)
Genome browser
AA seq
1710 aa
AA seq
DB search
MAYQKGRPGQAAIHYQTVAREVNPDQGEYQSYRRSVWLLQLSMFLNASCLFMDEVGIADH
NDHFHSTLFSISLFAHQSSEMRTKFLTPNYFAINKTLDFLRLPLPPLPSPSKPLASSDEV
LRCCNDSSSISVSLELESFPIDDALEKFYSDVLPHSIDACYDDNNWYTSQPSYGGVQIPE
KEANLFNEENATVNCLASDSVSLDSEFTEDGIGDKNLNKAAIIQFEAPEMTQYLESVCIF
EKEEEQLLSEVLNCDDDLEILNYVPANPSCFDIRDQVNSVEAICIEYDMTPKLQIPVEVD
TLLNNIHLIGTSFPLLEVDEIGQEDSTCLHLEDEYDFVFKTVEELSAHNVDLELCCKDLL
VSEEINLLEHIFDSHSSKLLLDFEFTSLIVAHDFDLLQVIEAPCIEKSTGLVNTCLIPFV
QTLLFEEFNILDSDSFDIFEALDTSQIYEDSELCNMFHGDMLLRNFDELIVSSELAIIDG
TFTSLSVPDLSNYERIWSLHVLADKIFTELEPVSLSTSDEIYLDWHLLGRDEYKDNVNAA
IEKVFDDIEDYTMCFNLESDDESMLVLDFLLSNGTSDRLDTSEKKLTIPCGVSFTAKRQN
DEVASVKLQDEDCQIIENTGNITDAGFDRSAFGNLSDLHKPDSSFQSMCQVNELDFFLNP
KKASGDMRTGHKFKPLDAKSMFPSVPHMQATVPSSSSQIEEIDVQMHRVILPANMNILVD
KLRRNYMEILREAVQLSNTELSTSFNEMNLLELSEEKILDLMHRTSERKSLSGHVVGNVL
DFVALCAIKRITWCLCFCGIHCLHLFLCKLLQSLDSLKPRLSFLYSLIDDAYRVVEKEVI
KSHPSLATLKTILLKNDNRQGRVLIVAQQVLSESLKRLLNSMNLSFAEVDLSTPDVQPDL
EYDFIVASTRDQIQTCLLVPHENISPSILVQKFNIIVEFESGDGVSKVSTLYHEYIGSRT
LHFLKIELDDIAKALCEGVKSPSTYGDMIKLEKLIDFGTIMEECKKSSKASGGASSCSIP
TPVGPIAQESKSVQPCDSSFSNMVIIVNTQNYEKEMIISRRSTYQKILTLENRGFQVVER
DLILPVDMILDTTMCIVWYDSDNIGNKATSEDGSTASIPLCIENIAANVLTSLSFAFTTC
ILIFEGESNFLGLVMESADELYAAAASLGIYLQIFCSYSLELTDEIILNYIGRSKNNYRR
LLPGLPESETLAESFLTKFSSINPLSAHAIISSGCMLMEFLELTAESRVQVLRKYYVPDE
SVNLFSSLCKYGEREETKSGVTDCSSSESSPPDSGSLVHKISSEDRKRKFALSSSDAIYD
FRSSIPLNNYVDDGLDSQGLLRSSDSKMEQSPRNCRQKLQPVFKLDDDLFPEGNARYTVN
TTDFSKAWCDIDVSGKSNVSQTEDDFTRSALPINDGFFSLQENGRKVKNKSDDSVMDILQ
DLNEDFVGEVVDFHNKSLFDGDFLIDKKRVKSAPVVFETVKDHAPRFDRIAKRLSFDSNS
DLSIAMPDAMANGHFRTDSNHNDIDYDWKNITFKGQEGQEQTNRSILENSKQSFSGQLSK
GINMPLYGETPFSKAVHSKQLQQGSPWTIEFLNRIKEKRRLRQQCPPYASVPRTGYQGNT
TKATKRRNPSILEYFKYQSGSTPRKVADQKLQKQHAQLRNESPQGYNSTWTPNDKRARRR
LSFATTGTGSQTKLVWSDDISFNQRNRLSS
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggcataccaaaaaggccggccaggccaagctgccattcattatcagacggttgcacgg
gaagtgaaccccgaccaaggggagtaccagagttatcgaagatcagtttggctccttcag
ttatcgatgttccttaatgcaagctgtttattcatggatgaagttggtattgctgaccac
aatgatcacttccattccactctcttctccatttctcttttcgctcatcaatcatcagaa
atgcgaaccaagtttctcactccgaactacttcgccattaataaaaccttagattttctt
cgtcttcctctccctcctcttccttctccttctaaacctctcgcatcttctgatgaagtt
cttcgctgttgcaacgattcgtcctccatttcagtctcactcgagctggaaagttttccg
attgatgatgcacttgaaaaattttactctgatgttcttcctcatagtattgatgcttgt
tatgatgataataattggtatacttctcagcctagctatggtggtgttcaaattccggag
aaagaagctaacttatttaatgaggaaaatgcaactgtgaattgtttagcttctgattct
gtatcattagatagtgaatttaccgaggatgggattggtgataagaatctcaataaggct
gcaatcatccagtttgaagcaccagaaatgactcaatatctggaaagcgtttgcatattt
gagaaagaagaggagcagttactatctgaagtgcttaattgtgatgatgatttggaaata
ctcaattatgtgcctgcaaatccatcttgttttgatattagagatcaagtgaactcggtg
gaggctatttgtattgaatatgacatgacaccgaagcttcagataccagttgaagttgat
accttgctaaacaatatccatctcattggcacctcgtttcctctgcttgaagttgacgaa
attggacaagaagattccacatgccttcatttggaagatgaatatgattttgttttcaag
accgttgaagaactttctgctcataatgttgatcttgagctttgttgtaaagatctactt
gtctctgaggaaatcaaccttttggagcatatttttgatagtcactcatcaaagctgctc
ctcgactttgagtttacaagcttgattgtggctcatgattttgatctcctacaagttata
gaagctccatgtatagagaaaagcactgggttggtaaatacctgccttatcccctttgtc
cagacattgttatttgaggaattcaatattctagattcagactcctttgacatatttgaa
gctcttgacacttctcaaatatatgaagatagtgaattgtgcaatatgttccatggagat
atgcttctacgaaattttgatgaattgattgtcagtagtgaactagcaattattgatggc
actttcacatcactgtctgtccctgatctatctaattatgagaggatctggtcattacat
gttcttgctgataaaatattcacagaattggaaccagtttccctctccacttctgatgaa
atttatttggattggcacctacttggaagggatgaatacaaggacaatgtaaatgctgcc
attgagaaggtgtttgatgacattgaagattatacaatgtgttttaacttagagtctgat
gatgaaagcatgttagttcttgactttcttttatcaaatggaacttcggatagactggat
acaagtgagaagaagctaaccattccatgtggagtgagcttcacagcaaaacgccagaat
gacgaagttgcatcagttaagttacaagatgaggattgccaaatcatagagaatacgggg
aatattaccgatgctggttttgataggtctgcatttggaaatttgtctgatttgcataag
cctgattcatcatttcagtcaatgtgccaggttaatgaactggattttttcttgaatccc
aaaaaggcttctggagatatgagaacgggtcacaaattcaagccactagatgccaaatct
atgtttcccagcgttcctcatatgcaagcaacagttccttcaagcagcagtcagatagag
gagattgatgtccagatgcatagagtcatattgcctgccaatatgaatatccttgttgat
aagctccgcagaaattatatggaaatacttagggaggctgtacaactgagcaacacagaa
ttatccacaagtttcaatgagatgaacttgctcgaactttcagaagagaagatactggat
ctcatgcacagaacctcagaacggaaatctttaagtggtcatgtggttggcaatgttctg
gattttgtcgcattgtgtgctatcaaacgaataacctggtgcctatgtttctgcggtatc
cactgcctacatctctttctttgcaaattgttacaaagtctggattctctaaaaccacga
ttaagctttctttactcattgattgatgatgcttatcgagttgtagaaaaagaagtgatt
aagtcacatccatcactagccactctcaaaacaattttgctaaagaatgataacagacaa
ggcagagtcttgattgtagctcaacaagttttatccgaatcattgaagaggcttttgaat
tccatgaacttatcatttgctgaagtagatctctccacacctgatgttcagccagattta
gaatatgattttattgttgcaagcacaagggaccagatacagacatgtttattggtgcct
catgagaatatatctccatcgatcttggtgcagaaattcaacattattgtggagtttgaa
agcggtgatggcgtatccaaagtgtcaaccctttaccatgagtacattggctctcgaact
ctacacttcttgaagattgagctggatgatattgctaaagcactgtgtgaaggtgtcaaa
tcaccttcaacttatggagatatgattaagctggaaaagcttattgattttgggactatt
atggaggaatgcaagaaatcttcgaaagcttcaggtggtgccagttcatgcagtattccg
acacctgttggtccaattgctcaagaatctaaatctgttcagccctgtgattcttcattc
tcaaatatggttatcattgttaatactcaaaattatgagaaagagatgataatatcccgg
agaagcacatatcagaaaatcttgactttggagaatagaggattccaagttgtagagagg
gatctaattttgcctgttgatatgatacttgatactactatgtgcatagtgtggtatgac
tctgataatattggaaacaaagccacttctgaagatgggagtactgcaagcatacccctc
tgcattgaaaatatagcagcaaatgttctgacatcactgagttttgcatttactacctgc
attctgatttttgagggagaaagcaacttccttggtcttgtgatggagtcagcagatgaa
ctatatgcagcggcagctagtcttggcatttatttgcagattttctgttcttattcactt
gagctgacagatgaaattatattgaattacattggacgttccaagaataattatagacga
ctacttcctgggcttcctgaatcagaaacacttgcagaatcattccttaccaaattctct
tctatcaatccactatctgcacatgcaattatatctagcggctgcatgctcatggagttt
ctggagttgacagctgaaagcagggtccaagtactcagaaaatactatgtaccggatgaa
agtgtaaatctttttagttccttgtgcaaatatggagagcgggaggaaaccaagtctgga
gtgactgactgttcttcttcagaatcttctcctcctgattcagggagtttggttcacaaa
attagctcagaagatagaaaaaggaaatttgctctaagttcctctgatgcaatatatgac
tttagatcttctataccattgaataactatgttgatgatgggttggattctcagggcttg
ttgaggtcatctgattctaaaatggaacaaagtccgaggaactgtcgacaaaagttacaa
cctgtcttcaaactagatgatgatttgtttcctgaaggaaatgcaagatatactgtcaat
acgacggatttttctaaagcttggtgtgatatagatgtctctggaaagtcaaatgtttcc
caaacggaggatgatttcactcgatccgctttacctataaatgatggcttttttagccta
caggaaaatggtaggaaagttaaaaacaaatcagatgacagtgtaatggatatacttcag
gatttgaatgaagattttgttggtgaagttgttgattttcataacaaatctttatttgat
ggtgactttctgatagataaaaaaagggtaaagtctgccccagtggtctttgaaactgta
aaagatcatgctcccagatttgataggattgctaaacggttatctttcgatagcaactct
gatctgagcattgcgatgcctgatgcaatggctaatggacattttaggacagatagcaat
cataatgatatagattatgactggaaaaacatcacttttaaaggccaagagggacaggag
caaacaaatagaagtatactagaaaattctaagcaaagcttcagtggccagttatcaaaa
ggaattaatatgcctctctatggtgaaacacctttctcaaaggctgttcattcaaagcaa
ctgcaacaagggtcaccttggacaatagaatttctcaaccgaattaaggagaagagaagg
ttacgtcaacagtgtccaccatatgcttcagttccacgcactggttatcaagggaacacc
acaaaagccacaaagagaagaaacccatctattcttgaatatttcaaataccagagtgga
agcacacccagaaaagtggcggaccagaaactgcaaaagcaacatgctcaactgcgcaat
gaaagccctcaaggatacaactcaacttggactcctaatgacaaaagagctagaaggagg
ctttcctttgcgaccactggaactgggagccaaacgaagcttgtttggagtgacgacatc
tctttcaatcagcgcaacaggttatcaagttga
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integrated database retrieval system
