Amaranthus tricolor (tampala): 130805528
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Entry
130805528 CDS
T09367
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130805528
03036 Chromosome and associated proteins [BR:
atri03036
]
130805528
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130805528
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130805528
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130805528
microRNA pathway
RISC loading complex
130805528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
130805528
NCBI-ProteinID:
XP_057526284
LinkDB
All DBs
Position
1:15184116..15190713
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AA seq
909 aa
AA seq
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MDSHDGNGSAEALPPPPPPPAEIPPDVVPIKAEDPPKKKRLPIARRGLGTKGQKIQLLSN
HFKVSVSNVDGHFFHYSVNLMYEDGRPVEAKGVGRKVLDRVQETYDTELSGKSFAYDGEK
SLFTVGALPGNKLEFTVVLDEVTSARNNNGNASPDGRDDPNEGDRKRVRRPYHSKTFKVE
LSFAAKIPMQAIANVIRGQENENSMEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFA
DVGGGVLGCRGFHSSFRGTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWTK
AKRMLKNLRIKTTTSNQEYKISGISEKPCRDQTFSLKQKGNDNGEAESEVTVYDYFVNHR
NIELRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQER
MSVLSHALKVSNYDAEPLLRSCGISISSSFTQINGRVLQAPKLKAGNGDEFFPRNGRWNF
NNKKLVEPAKIERWAVVNFSARCDTRNLVRDLIKCAEMKGIGIEPPFDVFEESPQNRRAP
PLVRVEKMFEDVQSKLPGAPKFLLCLLPERKNSDLYGPWKKKNLADFGIVTQCMAPTRVN
DQYLTNVLLKINAKLGGLNSMLVVEHNPSIPLISKVPTIILGMDVSHGSPGHSDVPSIAA
VVSSRQWPLISRYRASVRTQSPKVEMIDNLFKPVSDTEDEGIMRESLLDFYMSSGKRKPE
HIIIFRDGVSESQFNQVLNIELDKIIESCKFLDEKWNPKFVVIVAQKNHHTKFFQPGAPE
NVPPGTVVDNSVCHPRTYDFYMCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQELVNSLSY
VYQRSTTAISVVAPVCYAHLAATQMGQFMKSEDTSETSSSHGGMTSAGSIPVPQLPKLNE
NVSSSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggattcccatgatggaaacggatcggctgaagccttgcctccacctccaccccctcca
gctgaaatccccccagacgttgttcccattaaagcagaagatccgccaaagaagaaacgt
cttcctatagctagacgtggtcttggtactaaaggacaaaagatacagttgctcagtaat
cattttaaagtcagtgtgtctaatgtagacggtcatttctttcactacagtgtcaacctc
atgtatgaggatggtcgccctgtagaagctaaaggtgtaggcagaaaagtgcttgatagg
gtacaggaaacgtatgacacggagttgtctggcaagagctttgcttatgatggtgagaag
agtttgtttactgtaggagcactaccaggcaataagctggagtttactgttgttctggat
gaagtcacttcagctaggaataataatggtaacgcaagtcctgatgggcgtgatgatcca
aacgagggtgatcgaaagagagtacgacgtccgtaccactcaaaaactttcaaagttgaa
cttagttttgctgccaagattcctatgcaggccatagcaaatgtgatacgtggccaggaa
aatgaaaatagcatggaagccttgcgagtgcttgatatcatcttgagacaacatgctgct
aaacagggttgtttactagtgcgacaatcttttttccacaatgatcctaaaaactttgca
gatgtagggggtggtgtccttggttgtcgagggttccactctagctttcggggcactcag
tcaggcttgtctctgaacatagatgtgtctactactatgattatccagccaggacctgtt
gtcgatttcttgattgctaaccagaacgttagagatccattctcaattgattggactaag
gcgaaaagaatgttaaagaatctaaggatcaaaaccacaacttcaaaccaagaatacaaa
atatcggggattagtgaaaagccgtgcagagatcagacgttttcattgaagcaaaaaggt
aatgataatggtgaagctgaatcagaagtcactgtttatgattactttgtcaatcatcgc
aacatagagttgcgctactctgctgatctaccgtgcatcaatgtcggcaagcctaagcga
ccaacatacttcccactggagctgtgttcacttgtgtcacttcagaggtacacaaaatct
ttatctactcttcagcgtgcatcacttgtggagaaatctagacaaaagcctcaagagaga
atgagtgttttgtctcatgctttgaaggttagtaattatgatgccgagccgttgctccga
tcttgtggtatctctataagtagttcattcacgcaaattaatgggcgcgttcttcaagct
cctaagttgaaagctggaaacggggatgagttctttccacgtaatggacgttggaatttt
aacaacaagaaacttgtggaacctgccaagatagagcgctgggcagttgtaaatttctct
gctcgttgtgatactaggaatctcgtgagggatctgatcaaatgtgctgagatgaaaggc
attgggattgagccgccttttgatgtctttgaagagagccctcaaaatcgacgtgcacca
ccacttgtacgagtggagaaaatgtttgaggatgtacaatccaaactccctggtgctcct
aagtttcttctatgccttcttccagagagaaagaactctgacctctatggcccctggaag
aaaaagaatcttgctgactttggaattgtgactcaatgcatggctcccactcgggttaat
gatcagtatctgactaatgttcttttgaagatcaatgccaagcttggcggtctcaactca
atgttggttgtggagcataatccttcaatcccgctgatatcaaaggttcccacaatcatt
cttggtatggatgtatctcatggatcaccaggacactctgatgtgccatcaattgctgct
gttgtgagctcaaggcagtggcccctgatttcacgatacagagcgtcggtgaggactcaa
tcaccaaaagttgagatgatcgacaacctgttcaaacccgtatctgataccgaagacgaa
ggaataatgagggaaagtctgcttgatttttacatgagctcaggaaagagaaagcctgaa
cacattataatatttagagatggtgtcagcgagtcacagttcaatcaagttctgaacatt
gagctggacaagatcattgagtcctgcaaattccttgatgagaaatggaacccaaagttt
gtggtgattgttgctcagaaaaatcaccacacaaagtttttccagccgggcgctcctgaa
aatgttcctccaggtactgtagttgataacagtgtatgtcatccaaggacatatgacttc
tatatgtgtgcacatgcaggaatgattggtacaaccaggcctacccactatcatgttctg
ctggatgaagtgggtttttcacctgatgatttgcaagagcttgtcaattccctatcctat
gtgtatcagaggagtaccactgctatttctgtggttgccccggtgtgctatgcccatcta
gcagccacacaaatgggacagttcatgaagtctgaagacacttcggagacctcatctagc
cacgggggtatgacttcagctggttcgatacctgtgccacagcttccgaagctcaatgaa
aacgtgtcgagctcaatgtttttctgctga
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