Amaranthus tricolor (tampala): 130805533
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Entry
130805533 CDS
T09367
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130805533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atri03400
]
130805533
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
130805533
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
130805533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
Motif
Other DBs
NCBI-GeneID:
130805533
NCBI-ProteinID:
XP_057526288
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All DBs
Position
2:3163317..3171202
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AA seq
971 aa
AA seq
DB search
MLKGRESLRRIIGKRRRFLSNLSNILSYSCSLPSNSVNDGNGKQLLDGSATVKTEANSID
DKLEGSSSEKGFVDCPVCSTQIRADDWSVNSHLDLCLLRGTKRKLSQRTLLQFSFCPKLK
SSRCESEGVHAGTSDVVQVIEPAKNNLQLGSIGADEVTCAKSQCEMSRSYDGTSLKSSLV
FGSIIQHSKTFTEKIYIDDDADEMTDASSEPFGSGASDVDVEGILDDLSGTTLETCIVGR
KYVDAAEAVAGTSICFLRDPYNIKDPNAIKVTSADAGSGKILGFLPRELAQHLSPLIDKY
QLKFEGVITSVPKSSLDIIPIKIMCLKPPSYSEFSKDDIAMLRFLCNNIYCLMKSGKSSP
SSPIKYQKNFGLMIEDALTSNMHLFTDDEKFFLESFRSFSDDSQRLFVRLYSRKGPWFRI
SSFSYPEILDYQQAVDELSEASYVCSFGDSSGINDNDLEELLNILTVSELCEILQMLKKG
SKVGSRKKELIASLHSSFKDGLCPLLPSLIFDRTATCVRISSTAESLLWRVQRLFFLDGE
QDLSSFLLVDLRILKYPEYKCSISHPVFSTRSDLLAYEEAIEVAQIMDQSLEEGNSKLVL
QCIEIAEYQLSSDFMMKSQSLPLKSEVSFLQCFSAAWVNSKIVLLGVSIHEQERRYQDAI
KLLKLLLNSFTSGGRRGYWTLRLSIDLEHIGCIEQSLSVAEDGVLDPWVRAGSKMALQRR
VIRLGKPPRRWKTPSYASFVKRKITEVHIQGRPLSSKIGTKSRFYGQDDEQCGVEELALQ
FYAGEGGGWQGVHTESGIWLTIYGLLMWDIIFSDVPDTFRTRFQSAPLDMDSDNFYIARK
GIIEHHLQKIHNGMAETILIMSWELHYGTLCRGVNWERHSLSELRAAVSCIKGPSLSNLC
RLLSQDYRSWSSGMPDLLLWHFHEGYRGEAKLVEVKGPKDRLSEQQRAWLLTLIDCGFTV
EVCKVNPSALA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaggaagagaaagtctacgaaggatcatcggaaaacggaggagatttctttca
aatctctctaacatcctatcgtattcttgttctttgccgtcgaattctgtcaacgatgga
aacggtaagcaattacttgacggttctgccactgttaagacggaagctaactcaatcgat
gataaactagaaggttctagttcagagaaagggtttgttgattgtcctgtttgtagtaca
cagattcgcgctgatgattggtctgtcaattctcatcttgatttgtgtcttcttcgagga
acaaagcgaaaactaagtcaacgcactcttcttcagttcagcttttgcccaaaactcaaa
agtagtaggtgcgaaagtgagggagttcatgcagggactagtgatgtggtacaggtcatt
gaacctgcaaagaacaatctccagctgggaagcattggtgctgatgaagtaacttgtgcc
aaaagtcaatgtgaaatgagcagatcttatgatggaacctcattgaaatcatcattagtt
tttggttcaatcatccaacacagtaagacttttactgagaagatttacattgatgatgat
gcagatgagatgactgatgcttcttcagaaccctttggatctggtgcatcagatgttgat
gtggaaggaattcttgatgatttatctgggacgactcttgagacatgcattgtgggtcgt
aaatatgttgatgctgcagaagctgttgctggtacaagcatctgttttctaagagaccct
tacaacatcaaagatcctaatgccatcaaggttacatccgcagatgctggctctggaaaa
atcttaggttttcttcctcgggaattggctcaacatttgtcacctttgattgacaagtat
cagctgaagtttgagggagtgatcacttcagttccaaaaagctctttggatatcatcccc
atcaaaatcatgtgcctaaaaccaccatcttatagtgaattctcaaaagatgacattgct
atgctgaggtttttatgcaataatatttattgcctgatgaagtctggcaagagttctcca
tcgagccctataaagtaccagaagaatttcgggctcatgattgaagatgctttaacaagc
aatatgcatcttttcacagatgatgagaagtttttcttagaatcattccgctcattttct
gatgatagccaaaggctctttgtacgactttactcaagaaaaggaccatggtttcgcata
tctagtttttcatatccagaaatactggattatcaacaagcagttgatgaactctcagaa
gcgtcttatgtctgctcttttggtgatagtagcggcattaatgacaatgatttagaggaa
cttctgaacatcttaacagtgagcgagctgtgtgagatccttcaaatgctaaagaagggt
tccaaagttggctcgaggaagaaagagcttattgcatcactacactcttcatttaaagat
ggactctgtcctctccttccaagtttgatttttgacagaacagcaacatgtgttcgaatt
tcttcaactgctgaatctcttttgtggcgtgttcagagactattcttcttggatggagag
caagatttgtcttcattccttttagttgatttgcgaattctcaagtacccagagtacaaa
tgttcaatttcacatccagtattctctaccagaagtgacctgcttgcttatgaagaggcc
attgaagttgcacagattatggaccaatcccttgaagaaggcaactcaaagttggtgctt
caatgtatcgagatagccgaatatcaattgtcaagtgattttatgatgaaaagtcaatca
ttgcctttaaagtcagaagtttcatttcttcaatgtttttcagcagcttgggttaactct
aaaattgtcttgcttggtgtttccatccatgaacaagaacgtaggtaccaggatgccatc
aaattgttgaagctgttgcttaacagttttacttctggtggaagaagaggatactggaca
ttaagattgtccattgatttagaacacattggttgtatagaacagagtctctctgttgca
gaagatggtgttttagacccatgggttcgtgctggttcaaaaatggcgttgcaaaggcgg
gtcatacgcttagggaagccaccaaggcgttggaaaacccctagttatgcttcttttgtc
aaaagaaagatcacagaggtacatatccaagggagaccattaagcagcaaaatagggacg
aagagtagattttatggtcaagatgacgagcaatgtggagtagaagagcttgctctacaa
ttctatgcaggagaagggggtggctggcagggtgttcatacagaaagtggcatttggttg
accatatatggtcttcttatgtgggatattatattttcagatgtaccagatacatttcgc
accagatttcagagtgcacctttggacatggacagtgataacttttatattgccagaaaa
ggcattatcgaacatcacttgcagaagattcacaatggtatggccgagactatcctcata
atgtcgtgggagttgcattacggtacactttgcaggggtgttaactgggaaagacattca
ctttctgagcttcgtgctgctgtttcatgcatcaaaggcccttccctttcaaatctttgc
cggcttttgtcccaggattaccgaagttggtctagtggaatgcctgatttgctgttatgg
cattttcatgaaggctacaggggcgaagcaaaacttgttgaagtcaaaggccccaaagat
cggctttctgaacaacaacgagcatggctgcttaccttgattgattgtggcttcactgta
gaggtctgcaaagtaaacccttcagctttagcatga
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