Amaranthus tricolor (tampala): 130805538
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Entry
130805538 CDS
T09367
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130805538
03036 Chromosome and associated proteins [BR:
atri03036
]
130805538
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130805538
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130805538
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130805538
microRNA pathway
RISC loading complex
130805538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
130805538
NCBI-ProteinID:
XP_057526300
LinkDB
All DBs
Position
1:15184683..15218311
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AA seq
909 aa
AA seq
DB search
MDSHDENGSAEALPPPPPPPAEIPPDVVPIKAEDPPKKKRLPIARRGLGTKGQKIQLLSN
HFKVSVSNVDGHFFHYSVNLMYEDGRPVEAKGVGRKVLDRVQETYDTELSGKSFAYDGEK
SLFTVGALPGNKLEFTVVLDEVTSARNNNGNASPEGRDDPNEGDRKRVRRPYHSKTFKVE
LSFAAKIPMQAIANVIRGQENENSMEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFA
DVGGGVLGCRGFHSSFRGTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWTK
AKRMLKNLRIKTTTSNQEFKISGISEKPCRDQTFSLKQKGNDNGEAESEVTVYDYFVNHR
NIELRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQER
MSVLSHALKVSNYDAEPLLRSCGISISSSFTQINGRVLQAPKLKAGNGDEFFPRNGRWNF
NNKKLVEPAKIERWAVVNFSARCDTRNLVRDLIKCAEMKGIGIEPPFDVFEENPQNRRAP
PLVRVEKMFEDVQSKLPGAPKFLLCLLPERKNSDLYGPWKKKNLADFGIVTQCMAPTRVN
DQYLTNVLLKINAKLGGLNSMLVVEHNPSIPLISKVPTIILGMDVSHGSPGHSDVPSIAA
VVSSRQWPLISRYRASVRTQSPKVEMIDNLFKPVSDTEDEGIMRESLLDFYMSSGKRKPE
HIIIFRDGVSESQFNQVLNIELDKIIESCKFLDEKWNPKFVVIVAQKNHHTKFFQPGAPE
NVPPGTVVDNSVCHPRTYDFYMCAHAGMIGTTRPTHYRVLLDEVGFSPDDLQELVNSLSY
VYQRSTTAISVVAPVCYAHLAATQMGQFMKFEDTSETSSSHGGMTSAGSIPVPQLPKLNE
NVSSSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggattcccatgatgaaaacggatcggctgaagccttgcctccacctccaccccctcca
gctgaaattcccccagacgttgttcccattaaagcagaagatccgccaaagaagaaacgt
cttcctattgctagacgtggtcttggtactaaaggacaaaagatacagttgctcagtaat
cattttaaagtcagtgtgtctaatgtggacggtcacttctttcactacagtgtcaacctc
atgtatgaggatggtcgccctgtagaagctaagggtgtaggcagaaaagtgcttgacagg
gttcaggaaacatatgacacggagctgtccggcaagagctttgcttatgatggtgaaaag
agtttgtttactgtcggagcactgccaggaaataagctggagtttactgttgttctggat
gaagtcacttcagctaggaataataatggtaacgcaagtcctgaagggcgtgatgatcca
aatgagggtgatcgaaagagagtacgacgcccgtaccactcaaaaaccttcaaagttgaa
cttagttttgctgccaagattcctatgcaggccatagcaaatgtgatacgtggccaggaa
aatgagaatagtatggaagccttgcgagtgcttgatatcatcttgagacaacatgctgct
aaacaaggctgtttgctagttcgacaatcatttttccacaatgatcctaaaaacttcgca
gatgtagggggtggtgtccttgggtgtcgagggttccactctagctttcgaggaactcaa
tcaggattgtctctgaacatagatgtgtccactactatgattatccagccaggacctgtt
gtggatttcttgattgctaaccagaatgttagagatccgttctcaattgattggactaag
gcgaaaagaatgttgaagaatttgaggataaagactacaacttccaaccaagaattcaag
atatctgggattagtgaaaagccgtgcagagatcagacgttttcattgaagcaaaaaggt
aatgataatggtgaagctgaatcagaagtcactgtttatgattactttgtcaatcatcgc
aacatagagttgcgctactctgctgatctaccgtgcatcaatgttggcaagcctaagcga
ccaacttacttcccactggagctgtgttcacttgtgtcacttcagaggtacacaaaatct
ttatctactcttcagcgtgcatcacttgtggagaaatctagacaaaagcctcaagagaga
atgagtgttttgtctcatgctttgaaggttagtaattatgatgccgagccgttgctccga
tcttgtggtatctctataagtagttcattcacgcaaattaatgggcgcgttcttcaagct
cctaagttgaaagcaggaaacggggatgagttctttccacgtaatggacgttggaatttt
aacaacaagaaacttgtggaacctgccaagatagagcgctgggcagttgtaaatttctct
gctcgttgtgatactaggaatctcgtgagggatctgatcaaatgtgctgagatgaaaggc
attgggattgagccaccttttgatgtctttgaagagaaccctcaaaaccgacgtgcacca
ccacttgtacgggtggagaaaatgtttgaggatgtacaatccaaactccctggtgctcct
aagtttcttctatgccttcttccagagagaaagaactctgacctctatggcccctggaag
aaaaagaatcttgctgactttggaattgtgactcaatgcatggctcccactcgggttaat
gatcagtatctgactaatgttcttttgaagatcaatgccaagcttggcggtctcaactca
atgttggttgtggagcataatccttcaatcccgctgatatcaaaggttcccacaatcatt
cttggtatggatgtatctcatggatcaccaggacactctgatgtgccatcaattgctgct
gttgtgagctctaggcagtggcccctgatttcacgatacagagcgtcggtgaggactcaa
tctccaaaagttgagatgatcgacaacctgttcaaacccgtatctgataccgaagacgaa
ggaataatgagggaaagtctgcttgatttttacatgagctcaggaaagagaaagcctgaa
cacattataatatttagagatggtgtcagcgagtcacagttcaatcaagttctgaacatt
gagctggacaagatcattgagtcctgcaaattccttgatgagaaatggaacccaaagttt
gtggtgattgttgctcagaaaaatcaccacacaaagtttttccagccgggcgctcctgaa
aatgttcctccaggtactgtagttgataacagtgtatgtcatccaaggacatatgatttc
tatatgtgtgcacatgcaggaatgattggtacgaccaggcctacccactaccgtgttctg
ctggatgaagtgggtttttcacctgatgatttgcaagagcttgttaattctctatcctat
gtgtatcagaggagtaccacagctatttctgttgttgccccggtgtgctatgcccattta
gcagccacacaaatgggacagtttatgaagtttgaagacacttcagaaacatcgtctagc
cacgggggtatgacttcagctggttcgatacctgtgcctcagcttccaaagctcaatgaa
aacgtgtcgagttcaatgtttttctgctga
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