Amaranthus tricolor (tampala): 130805552
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Entry
130805552 CDS
T09367
Name
(RefSeq) protein argonaute 4B-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130805552
03036 Chromosome and associated proteins [BR:
atri03036
]
130805552
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130805552
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130805552
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130805552
microRNA pathway
RISC loading complex
130805552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
130805552
NCBI-ProteinID:
XP_057526312
LinkDB
All DBs
Position
1:15225223..15233752
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AA seq
910 aa
AA seq
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MDSHDGNGSAEALPPPPPPPAEIPPDVVPIKVEDPPKKKRVPIARRGLGTKGQKIQLLSN
HFKVSVSNVEGHFFHYSVNLMYEDGRPVEAKGVGRKVLDRVQETYDTELSGKSFAYDGEK
SLFTVGALPGNKLEFTVVLDEVSSARNNNGNASPDGRDDPNEGDRKRVRRPYQSKTFKVE
LSFAAKIPMQAIANVIRGQENENSMEAVRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFA
DVGGGVLGCRGFHSSFRGTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAK
AKRVLKNLRIKTTTSNQEFKITGLSEKPCRDQTFSLKQRGNENGEADASEVTVYDYFVNH
RNVELRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQE
RMSVLSHALKVSNYDAEPMLRSCGISISSSFTQINGRVLQAPKLKAGNGDEFFPRNGRWN
FNNKKLVEPAKIERWAVVNFSARCDTRNLVRDLIKCAEMKGIAIEPPFDVFEESPQNRRA
PPLVRVEKMFEDVQSKLPGAPKFLLCLLPERKNCDLYGPWKKKNLADFGIVTQCMAPTRV
NDQYLTNCLLKINAKLGGLNSMLVVEHNPSIPLVSKVPTIILGMDVSHGSPGHSDVPSIA
AVVSSRQWPLISRYRASVRTQSPKVEMIDNLFKPVSDTEDEGIMRESLLDFYVSSGKRKP
EHVIIFRDGVSESQFNQVLNIELDKIIESCKFLDEKWNPKFVVIVAQKNHHTKFFQPGAP
ENVPPGTVIDNSVCHPRTYDFYMCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQELVHSLS
YVYQRSTTAISVVAPVCYAHLAATQMGQWMKFEDTSETSSSHGGMTSAGSIPVPQLPKLN
ENVSSSMFFC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggattcccatgatggaaatggatcggcagaagctttacctccacctccaccccctccg
gcagaaattccacccgacgttgttcctataaaagtagaagatccgccaaagaagaaacga
gttcctattgctagacgcggtcttggtactaaagggcaaaagatacagttgctcagtaat
cattttaaagtcagtgtgtctaatgtggaaggtcacttctttcattacagtgtcaacctc
atgtatgaggatggacggcctgtagaagctaagggcgtaggcagaaaagttcttgatagg
gttcaggaaacatatgacacggagttgtctgggaagagctttgcttatgatggtgaaaag
agtttgtttactgttggtgcacttccaggcaataagctcgagtttactgttgttctggat
gaagtcagttcagctaggaataataatggtaatgcaagtcctgatgggcgtgatgatcca
aatgagggtgatcgaaagagagtacggcgcccttaccagtctaaaacttttaaagttgaa
cttagttttgctgcaaagattcctatgcaagccatagcaaatgtgatacgtggccaggaa
aatgagaatagcatggaagctgtgcgagttctagatatcatcttgagacaacatgctgct
aaacagggttgtttgctcgttcgacagtcatttttccataatgatccgaagaactttgct
gatgtggggggtggtgtccttggttgtcgtgggtttcactctagcttccggggcactcag
tctggcttgtctctgaacattgatgtgtctactactatgattattcagccaggacccgtt
gtggatttcttaattgctaaccagaatgttagagatccgttttctattgattgggctaag
gcgaaaagagtattgaagaatttgaggatcaagacgacaacgtctaaccaagaattcaaa
ataaccggacttagtgagaagccatgcagagatcagacgttttcactgaagcaacggggt
aatgagaatggtgaagctgatgcttcagaagtcactgtttatgattactttgtcaatcac
cgcaacgtagagttgcgctactctgctgatctaccgtgcataaatgtcggcaagcctaaa
cgaccaacttacttcccactggagctgtgttcgttagtatcacttcagaggtacacgaaa
gctttatccactcttcagagagcatcactcgtggagaaatctagacaaaagccccaagag
agaatgagtgttttgtctcatgcattgaaggtcagtaattatgatgctgagccgatgctt
cgttcttgtgggatctctataagtagttcattcacgcaaattaatgggcgtgttcttcaa
gctcctaagttgaaagctggaaatggagatgagttctttcctcgtaacgggcgttggaat
tttaataacaagaaacttgtagaacctgctaagatagagcgctgggcagtggtgaatttc
tctgctcggtgtgatactaggaatcttgttagggatctgatcaaatgtgctgagatgaaa
ggcattgccattgagccgccttttgatgtctttgaggagagcccacaaaaccgacgtgca
ccgccacttgtacgagtggagaaaatgtttgaggatgtacaatccaaactccctggtgct
cctaaatttctcctatgccttcttccggagagaaagaactgtgatctctatggcccctgg
aagaagaaaaatcttgctgactttggaattgtgacccaatgtatggctcccactcgggtc
aatgatcagtatctcacaaattgtctattgaagatcaatgccaagcttggtggtctcaac
tcaatgttggttgtggagcacaatccctcaatacctttggtatcaaaggttcctacaatc
attctcggtatggatgtatctcacggatcaccagggcactctgatgtgccgtcaattgct
gctgttgtgagttcaaggcagtggccattgatttcgcgatacagggcgtcagtgaggact
cagtctccaaaagttgagatgattgacaatttgtttaaacctgtatctgatactgaagac
gaaggaataatgagggaaagtttgcttgatttctacgtcagttctgggaagagaaagcct
gaacacgtcataatttttagggacggtgtaagtgagtcacagtttaatcaagtgctgaac
attgagctcgacaaaatcattgagtcgtgcaaattccttgatgagaaatggaacccaaag
ttcgtggtgattgttgctcagaagaatcaccacacaaagtttttccagccgggtgctcct
gaaaacgttcctccaggaactgtgattgataacagtgtctgccatccaagaacttatgac
ttttatatgtgtgcacacgctggaatgattggtactacaaggcctacccactatcatgtt
ctgctggatgaggtgggtttctccccagatgatttgcaggaacttgtgcattctctttcc
tatgtgtatcagaggagtacaacagctatatctgtcgttgccccggtgtgctatgcccat
ttggcagccacacaaatgggacagtggatgaagtttgaagacacttcagagacgtcatca
agccatgggggtatgacttcagctggctcgatacccgtgccacagcttccgaaactgaat
gaaaatgtgtcgagttcaatgtttttctgctga
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