Amaranthus tricolor (tampala): 130806004
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Entry
130806004 CDS
T09367
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00750
Vitamin B6 metabolism
atri01100
Metabolic pathways
atri01240
Biosynthesis of cofactors
Module
atri_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
130806004
Enzymes [BR:
atri01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
130806004
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Motif
Pfam:
SNO
GATase_3
BPL_N
GATase
DJ-1_PfpI
Peptidase_S51
DUF2190
Motif
Other DBs
NCBI-GeneID:
130806004
NCBI-ProteinID:
XP_057526871
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Position
2:39682354..39687870
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AA seq
254 aa
AA seq
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MAVGVLAFQGSFNEHIAALRRIGVKGVEIRKPEQLGDIAALIIPGGESTTMAKLAEYHNM
FPALREFVKMGKPVWGTCAGLIFLANKVFGQKTDGQELVGGLDCTVHRNFFGSQIQSFEA
EISVPHVADKEGGPPGFRGVFIRAPAILEVGSEVEILAEVPVPDKLKTSEVIKESQKVYP
ESLNKVIVAVKQGNLLGTAFHPELTADNRWHLYFIKMVNDQIEETETATSSGIIKAGDIY
GLQDPKIELPIYLP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctgttggtgttcttgcttttcagggttcttttaatgaacacattgcggcactgagg
aggattggtgttaaaggagtggaaattcggaagcctgaacagttgggtgacattgctgcg
cttatcattcctggtggtgaaagtacaaccatggctaaacttgctgagtatcacaacatg
tttcctgccttgagggagtttgtcaagatgggcaagccagtttggggaacatgtgcaggg
ttgattttcttggcaaataaagtttttggtcagaaaactgatggacaggaacttgtaggg
ggtcttgattgcacagtccacaggaatttctttggaagccagattcaaagttttgaggct
gagatatctgtacctcatgtagcagataaagaaggtggtccaccaggtttccgtggtgta
ttcatccgtgctcctgctatactagaagttggttcagaagttgaaatattggcggaagtt
cctgttccagataaactgaagacttcagaagtcataaaggagagccaaaaggtgtatccc
gaatctctaaacaaagtgattgtagctgtaaagcaagggaatttgctcggaacagccttc
catccagagttaactgctgataatcgatggcatttgtacttcataaagatggtaaacgac
cagatcgaggagacggagaccgcgacttcaagcggtatcatcaaagccggggacatatat
ggcttgcaagatccaaagattgaactccccatatatttaccttag
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