Amaranthus tricolor (tampala): 130806034
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Entry
130806034 CDS
T09367
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00061
Fatty acid biosynthesis
atri00071
Fatty acid degradation
atri01100
Metabolic pathways
atri01212
Fatty acid metabolism
atri04146
Peroxisome
Module
atri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130806034
00071 Fatty acid degradation
130806034
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130806034
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atri01004
]
130806034
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130806034
Enzymes [BR:
atri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
130806034
Lipid biosynthesis proteins [BR:
atri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130806034
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of breast milk
130806034
Exosomal proteins of breast cancer cells
130806034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
130806034
NCBI-ProteinID:
XP_057526905
LinkDB
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Position
2:complement(39958250..39977602)
Genome browser
AA seq
731 aa
AA seq
DB search
MADTKGSSSSSQMLEKLANCEHLQLLKSQCPYSVTGTVAIAVIIPLLLSILWVGRKKVKQ
RGVPVHVGGEEGLTMRNGKFKELVEVPWEGASTVAALFEQACKKHGNHPFLGTRKLVDKE
FIQASDGRKFEKVHLGEYQWETYGKVFNRACNFAAGLVKLGHDIDTRVAIFSETRAEWFI
ALQGCLRQSITVVTIYASLGEDALIHSLNETQVSTLICDSKQFKKAASILSKLETIKNII
YFEEDGESNDFGISGDMGNVEAASFHDVEKLGKDNPSDPRLPEKDDIAVVMYTSGSTGLP
KGVMMTHGNIVATAAAVITVVPGLGRDDVYLAYLPLAHVLELEAETVMLAAGAAIGYGTT
LTLTDTSNKIKKGTKGDVSVLQPTLMAAVPAIIDRVRDGVLKKVEEKGGFVKKLFNVAYK
RRLAAVEGSWFGAWGPEKFLWDVMVFKKIQSVLGGRIRFMLCGGAPLSGESQRFINICMG
APIGQGYGLTETCAGAAFTEWDDVTVGRVGPPLPCCYIKLVSWEEGGYTTLDKPMPRGEI
VIGGQSVTVGYFRNEDKTKEVYKVDERGMRWFYTGDIGQFHADGCLEIIDRKKDIVKLQH
GEYISLGKVEAALMSSNYVDNIMLYADPFHSYCVALVVPSHSELQKWAQESGIQYTSLTE
LCDKPEVIKEVQASLSKIGKVAKLDKFEIPAKIKLIPDPWTPESGLVTAALKLKREQLKA
KFKDELNKLYA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacaaagggaagttcttcaagctcacagatgctggagaagttagctaattgt
gagcatttacagttattgaaaagtcaatgcccttatagcgttactggaacagtggcaatt
gctgtgataatacctctattgctttcgatcttatgggtgggcaggaagaaagttaagcaa
agaggagttccggtgcatgttggcggtgaagaaggtttgactatgcgcaatgggaaattt
aaggagttggtagaggttccttgggaaggggcctcaactgtggccgctctctttgagcaa
gcttgtaagaaacatggaaatcatccttttcttggaactaggaaactagtagataaagag
tttatacaagccagtgatggaaggaagtttgaaaaggtgcatttaggtgaataccaatgg
gaaacatatgggaaggttttcaatcgtgcttgcaattttgctgctggacttgtcaaacta
ggtcatgatatcgatacacgtgtggctattttctctgaaacaagggccgagtggtttatt
gcattgcagggatgcttgcgacagagtattacagttgtcaccatctatgcctctttaggt
gaggatgcattgatccactcccttaatgagactcaagtgtcgaccttgatatgtgattcg
aagcaattcaagaaggcagcttctatactttcaaaattggaaacaattaaaaatatcatc
tattttgaggaagatggagagtcaaatgattttggcatctctggtgatatgggtaacgta
gaagcagcatcttttcatgatgttgaaaaacttggaaaggataacccttcggatcctaga
ctaccagagaaggatgatattgctgttgttatgtatacaagtggaagcacagggttgcct
aagggagttatgatgactcatggaaacatagtagctactgcagcagctgtcattactgtg
gtgcctggtcttggaagggatgatgtctacttagcatatctgcctctagctcatgttttg
gaattggaagctgagactgtgatgttagctgcaggtgctgcaattggctatggcacaaca
ttgacattaactgatacatcaaacaaaataaagaaaggaaccaagggtgatgtgtctgta
ttgcagcccaccctcatggcagcagtgccagccattatagaccgtgttcgtgatggggtt
ctcaaaaaggttgaagagaaggggggttttgttaaaaagcttttcaatgttgcctataaa
cgtcgattggctgctgtagaaggaagttggtttggtgcttggggcccggagaaatttttg
tgggatgtgatggtttttaaaaaaattcaatctgttcttggtggacgtattcgttttatg
ttgtgtggtggagctccattatccggagagtcgcagcgttttatcaacatttgcatgggg
gctccgattggacaaggatacggtttgacagagacctgtgctggtgcagctttcaccgag
tgggatgacgttactgttggccgtgttggtcctcctcttccttgttgctacattaagctt
gtttcctgggaagaaggtggatatacaacattagacaaaccaatgccaagaggcgagatt
gttattggtggacagagtgtgacagttggttatttcagaaatgaagataaaactaaagaa
gtctacaaggttgatgaaagagggatgcgctggttttacacaggtgatattgggcaattt
catgcagatggatgccttgaaatcattgatagaaagaaagatattgtaaagcttcaacat
ggagaatatatctctctaggcaaggttgaagcagccctgatgtcgagtaattatgtagac
aatattatgttatatgcagacccattccatagttattgtgtagctcttgttgttccttcc
cattcagaactacagaaatgggcacaagaatctggcattcagtacacaagtttgactgag
ctgtgcgacaaacctgaagtaattaaggaagtccaagcatctctgtcaaagatcggaaag
gttgcaaagctggacaagttcgaaattcctgcaaaaattaaattgataccagatccatgg
acacccgagtcaggactagtcacagctgcccttaagttgaagagggagcagcttaaagcc
aagttcaaggatgagctcaataaattatacgcataa
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