Amaranthus tricolor (tampala): 130806090
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Entry
130806090 CDS
T09367
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130806090
Enzymes [BR:
atri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
130806090
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
130806090
Prokaryotic type
130806090
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
ADH_zinc_N_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
130806090
NCBI-ProteinID:
XP_057526999
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Position
2:complement(40407638..40413685)
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AA seq
357 aa
AA seq
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MQVFLTSSTPNNPPYLHTFNDPILHSCPSFPPPNLSFNSNVKSSRLEAIKGSGIFSAIGK
AIEEEEYRKARAEVQRKGFEIDGYSIEGISVGGHETCVIVPELKCVFDIGRCPLRAVHQN
FVFITHAHLDHIGGLPMYVATRALYSLKPPTIVVPPCIKEDVEKLFDIHRSMGQVELDFD
LVALDIGETYELRNNLVVRPFKTYHVIPSQGYVIYSIRNKLKKQYIHLKGKQIEKLKNSG
VEITDMILSPEVAFTGDTTSDFLLEPRNADALRAKLLITEATFLDDRFSIEDARERGHTH
LFELIELAQWIRNKTVLLTHFSSRYHLEDIRQAVSKLQAKVSAKVVPLTEGFKSMYS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtctttctcacatcttcaacacctaataacccaccttatcttcacacttttaat
gacccaattctgcattcatgtccatcatttccaccccccaatctctcgttcaatagcaat
gtaaaatcgagtcgtttagaagccattaaagggtctggcatattctctgcaattggaaaa
gcaattgaagaagaagagtacagaaaagcaagagctgaagttcaaagaaaagggtttgaa
attgatgggtattcaattgagggtatttctgttggtgggcatgaaacttgtgttattgtt
cctgaattgaagtgtgtttttgatattgggaggtgccctttgcgtgctgttcatcaaaat
tttgtctttattactcatgctcatcttgatcatattggaggattaccaatgtatgtagca
actcgtgctctatatagcctgaaaccaccaactatcgtcgtgccaccctgcattaaagag
gatgtagagaagttattcgacattcatagatccatgggtcaagtggaacttgattttgat
ttggtagcacttgatattggggaaacttatgaactaaggaacaaccttgttgtgagacca
ttcaagacttatcatgttatacccagtcagggatatgttatatattctattagaaataag
ttgaagaagcaatacattcatttgaaaggaaaacaaatcgagaaactaaaaaattctggt
gtcgagatcacagacatgatattatctcccgaggttgcattcacgggagacacaacgtca
gattttttgctagaaccacgtaatgccgatgcactgcgggcaaaacttcttataaccgag
gcaacttttctcgatgatagatttagcattgaagatgctcgcgagcgcggtcatactcac
ttatttgagctcattgaacttgctcagtggatacgaaacaaaactgttttgcttacgcat
ttctcttcccgctaccatcttgaggacatccgtcaagcggtatcgaagttacaggcaaag
gtatctgcaaaagtagtcccccttacagaaggcttcaagtccatgtactcatag
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