Amaranthus tricolor (tampala): 130806178
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Entry
130806178 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130806178 isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130806178
Enzymes [BR:
atri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
130806178
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
130806178
Prokaryotic type
Methylthiotransferases
130806178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
130806178
NCBI-ProteinID:
XP_057527120
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Position
2:complement(7015261..7022743)
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AA seq
619 aa
AA seq
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MEDIEDLLVGDGGVAPGFRLPVTSVGLNPKKKSIKSNKQYLVQDPLQSVKIPGTQNIYIK
TFGCSHNQSDSEYMAGQLSAYGYTLIDTPEEADLWLINTCTVKSPSQSAMDTLISKGKSA
NKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVIEVVEETLKGHEVRLLNRRTLPALDL
PKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTMESLVRRVKSVISEGVREVWLS
SEDTGAYGRDIGVNLPILLKAIIAELPSTGSTMLRVGMTNPPYILEHLKEIAEVLCHPSV
YSFLHVPVQSGSNSVLTAMNREYTVEEFRTVVDTLTTLVPGMQIATDIICGFPGETDDDF
DQTVELIKEYKLAQVHISQFYPRPGTPAARMKKVPSAIVKKRSRQLTAVFESFTPYNGME
GLIERVWITDVAADGIHLVGHTKGYIQVLIKESPETLLGASATVRITSVGRWSVFGEVIE
ILSSSVPDRALNKDDSSHNISSSCGAGAEPCACSSELDSCCGGGHCADTAEATVSPLNGT
PAEDAQNVNERRKRKTLVSNGTESVESRKPNLKEEFIKVRASTSQWNYIDKSLIAGIILS
FLVAVVSLSELWFRKTKSS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaggatattgaagatttactggttggagatgggggagttgctcctgggtttagattg
cctgtaacttctgttgggttaaaccctaagaaaaaatccattaaatctaataagcaatat
cttgttcaagacccacttcaatcagttaaaattccgggtacacagaatatttatataaaa
acttttggatgctctcataaccagagtgacagtgagtacatggccggtcagctttcagcc
tatgggtataccttaattgacactcctgaagaggcagatttgtggctgatcaatacatgc
acagtaaaatcaccaagtcaatctgccatggatactcttatttcaaaaggtaaaagtgca
aacaaacccctggttgtagctggctgtgtgccacaaggaagtcggaacttaaaagagctt
gaaggagttagtattgttggtgtgcagcaaattgatcgtgttatagaagttgtggaagag
actttgaaaggacatgaggtgcggcttttaaataggagaacactacctgctcttgacctc
ccaaaggtgcgaaaaaacaaatttattgagattcttccaattaatgtcgggtgtttaggt
gcgtgcacttactgcaaaacaaagcatgctcgtggtcatctaggtagctatacaatggag
agcctggttcggcgagtgaaatctgtcatttctgagggagtcagggaggtatggttgagc
agtgaggatactggagcatatggtcgtgacattggggttaatcttcctattcttttgaag
gccattatcgctgagctcccatcaactggaagcacaatgcttcgtgttgggatgactaat
cccccgtatattcttgaacacctgaaagaaattgctgaagtcttatgtcacccttctgta
tactcctttcttcatgttcctgttcaatctgggagcaattctgtcttaactgctatgaat
cgagaatatactgtggaggagttcaggacagtagtggatacgttgaccacacttgttcct
gggatgcagattgcaactgatataatatgtggttttcctggtgaaactgatgatgacttt
gatcaaactgttgagcttattaaggagtataagcttgctcaagttcatatctcacaattc
tatcctcgacctgggacacctgctgcaaggatgaagaaggttccaagtgctattgtaaag
aagcggagtcgtcaattaactgctgtctttgaatcctttactccatataacggaatggaa
gggttaattgagagagtatggataactgatgttgcagctgatggaattcacttggtcgga
cataccaaaggatacatacaagtattaatcaaggaatctccagaaacccttctaggtgct
tcagctactgttcggatcacttctgttggaagatggtcagttttcggcgaagttatagaa
attctctcttccagtgtcccagacagagctttgaacaaggatgattcgagtcacaatata
tcatcctcatgtggtgctggtgctgaaccttgtgcatgctcgtcggagctagattcatgc
tgtggtggaggacattgtgctgatactgcagaagcaacagttagccccctcaatggcacg
ccagcagaggatgctcaaaacgttaatgagcggaggaagcggaaaacacttgtatctaat
ggcaccgagagtgtagagtctcggaaacctaacctgaaagaagaattcatcaaggtaaga
gcaagcacgtcgcagtggaattatattgataaatctcttattgccggtataattctgagc
tttttggttgctgtagtttcgctttctgaactctggttcaggaagacgaagtccagttaa
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