Amaranthus tricolor (tampala): 130806201
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Entry
130806201 CDS
T09367
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130806201
03036 Chromosome and associated proteins [BR:
atri03036
]
130806201
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130806201
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130806201
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130806201
microRNA pathway
RISC loading complex
130806201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
130806201
NCBI-ProteinID:
XP_057527179
LinkDB
All DBs
Position
2:complement(38271531..38280640)
Genome browser
AA seq
896 aa
AA seq
DB search
MGIQGDHGAALPPPPPIHAGVVPRRCPMNRNDFGSKGQKVQLLTNHFQVRMARSDCHFYQ
YSVEMAYEDGTAVDAKGVGRGVIDKLHETYKTELGGKQIAYDGESTLFTLGALPRNKLQF
TVVLGEQQRSGKAGNPGSPEDNEDPNTGERKRLRRPQRSKTYTVDVSYATKIPLQAITNA
LRGQDSEHYQEAVRVLDVVLRQHAARRGCLLVRQSFFRNEPKNFFDIGGGVLGCRGFHSS
FRATQGGLSLNIDVSTTMIVQPGPVMDFLVSNQNVPHPDQIDWVKAKRMLKNLRITTKTS
NLEFKITGLSDKICRDQIFELRQRNGDGQHQSVEITVHDYFVQHHNISLRYSSKYPCINV
GRPKRPSYFPIEMCDLVSLQRYTKSLSGHQRASLVEKSRQKPQERMRVLTDALRASNYAA
DQMLIASGINISIEFAQVEGRILPAPQLKVGSGQDLVPRRGRWNFNNKGLFEPVEALDRW
VIVNFSARVDMNMLSRDIVKCGQRKGMKIRDPFKVFQENHQDRRLPAPRRVENMMDSVKN
GLPGPPQLILCVLPDRKICDIYGPWKRKALAEIGLVTQCISPQKLNDQYLTNVLLKINAK
LGGLNSVLSIEHARNIPFVSEAPTLIIGMDVSNGSPGRTDVPSIAAVVSSRGWPLISRYR
ASVRTQSPKVEIIDGLFKPDPETNTDDGMIRESLLDFFKSSNKRKPENIIIFRDGVSESQ
FSQVLNIELDQIKEACKFLEENWNPKFTLVVAQKNHHTKFFQRNSPDNVEPGTVVDNGIC
HPKNNDFYMCAHAGMIGTTRPTHYQVLIDEIGFSGGDLQDLVHSLSYVYQRSTTAISVVA
PVCYAHLAASQVAQFMKFDEFSDTSSSHGGVTSVGSASIPQLPRLHPNVSSSMFFC
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtatacaaggagatcatggtgctgcacttccacctccaccacctattcatgcaggt
gttgtgcctaggagatgccctatgaataggaatgactttggctcaaagggtcaaaaagtt
cagctcttgaccaaccattttcaagtcagaatggctcgttctgattgtcacttctaccaa
tacagtgttgaaatggcttatgaagatggaactgctgttgatgcaaaaggtgtaggaaga
ggagtaattgataagttacatgaaacttataaaactgagcttggtggtaagcagattgct
tatgatggcgagtctactttgttcactcttggtgctttacctcgtaacaagcttcagttc
actgttgtcttgggcgagcaacaaagatctggaaaggctgggaatcctggtagtcctgaa
gacaatgaagatcctaatactggtgaaaggaaaagacttaggaggccacaaagatcaaag
acttacacggttgacgtaagctatgcaaccaagattcctttacaagcaataaccaatgca
ttgcgaggtcaagattctgaacattatcaagaggctgtcagggttcttgatgttgtacta
agacaacatgctgcaagacgaggttgtcttttggtgagacaatcgttttttcgtaatgaa
ccgaaaaatttttttgacattggtggaggagttcttggatgtagaggatttcactctagt
tttagagctacccaaggaggcctatctcttaatattgatgtttcaacaactatgattgtt
cagccaggtcctgtaatggacttccttgtatcaaaccaaaacgttccccatcctgatcag
atcgactgggttaaggctaagagaatgctaaagaacctaaggatcactaccaaaacttca
aacctcgagttcaaaatcaccggactgagcgacaaaatctgcagggatcaaattttcgaa
ctaaggcaacgcaatggcgatgggcaacaccaaagtgtcgagataactgtgcatgactac
ttcgtgcagcatcataacatcagcttacgttattcatctaagtacccgtgtatcaatgtt
gggagaccgaagagaccatcttacttccctatcgagatgtgtgatttggtttcgttgcaa
cgatacacaaaatcgttgtcaggacatcaaagagcgagcctggttgagaaatctcgtcag
aagcctcaagagcggatgagagtactcactgatgctctgcgggctagcaattacgcagca
gatcaaatgcttattgcatcgggaatcaacatcagtattgagttcgctcaagttgagggc
cgaatcttgcctgcaccccagctaaaagttggaagtgggcaagatttggtcccacgtagg
ggtcgatggaacttcaacaataagggattgttcgagccagtggaagctttagacagatgg
gttatcgtaaacttttctgctcgagttgatatgaacatgctgtcacgcgacattgtgaag
tgtggccagcgaaaaggaatgaaaatccgagatccattcaaagtatttcaagagaatcat
caagatcggaggctgcctgctccgagaagggtagaaaacatgatggattcggtgaaaaat
ggactccctggaccgccccaacttattttgtgcgttcttcctgataggaaaatctgcgat
atctatggtccatggaagaggaaagctctcgctgagattggtctagttacgcaatgcata
tcgccccaaaagctgaacgatcaataccttacgaatgttcttctgaaaatcaacgcgaag
ttgggtggtcttaattcggtgttgtctatcgagcatgctcgaaacatcccttttgtttcg
gaggcaccaactctaattatagggatggatgtgtcgaatggctcccctggacgcactgat
gttccatcgattgcagcagttgtgagttcgcggggatggccattgatttctcgttatcgt
gcatctgttcgtactcaatctcctaaagtcgagatcatcgatggtctttttaagcctgat
cccgaaaccaacactgatgatggcatgattagggaatcgttgcttgatttcttcaagagt
tccaacaaacgtaagcccgaaaacataattatattcagggatggtgtaagtgaatctcaa
tttagtcaagttcttaacattgaacttgatcagattaaggaggcatgtaagttccttgaa
gagaattggaaccctaaattcacgttggtcgttgctcagaagaatcatcacacgaagttc
tttcagcgcaattctccggataatgtcgaacctggaactgtcgttgataatggcatttgt
catccgaaaaacaatgatttctacatgtgtgcccatgccggaatgattggaactactcgg
cctactcattatcaagtgttgattgatgagattggtttttcgggtggtgatttacaagat
cttgttcattcactttcctatgtgtatcaaagaagcacaacagctatctccgtggttgct
cctgtgtgctatgctcatctagcagcgagtcaagtggcgcagttcatgaagtttgatgag
ttctcagatacctcctcaagtcatggcggtgttacttcggttggtagtgcgtctattcct
caactccctcgtcttcatcctaatgttagtagttctatgttcttctgctga
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