Amaranthus tricolor (tampala): 130806315
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Entry
130806315 CDS
T09367
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130806315
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
130806315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
130806315
NCBI-ProteinID:
XP_057527318
LinkDB
All DBs
Position
2:35857044..35862018
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AA seq
698 aa
AA seq
DB search
MASYRPYPPPQQASFAPPPAQAPLPPLPHRPQSLGNQYSQNWGSAPPPYSQNYAQAPSNP
NFQHSSYNAASHQYQHPPPLPHQQQQQYPFQPPPPPPDSLYPPPPPPPPSSQNSVDNAHQ
QYYPSSQYSQFSQQPPLQPPPPPPPPPSSPPPNSSAPPPPPPPSSPPPPPRQIKESGGER
VKHDRDRRAAKEGNNHFSSRQPKPPVPPGPVKKANGAPGRMETEEERRLRKKREMEKQKL
VDRHKQHMKETQNRPKQPQVLPPGAKAHLSISGSRIGERRATPVIGGDRDENPMKRQTAF
MCRMKFRNELPDPSSQPKLMNLNRDKDRFTRYTITSLEKMHKPKLYVEPDLGIPLDLLDL
SVYNPPVERFPLAPEDEELLRDDEAATPLKRDGIKRKERPSDQGVSWLVKTQYISPLSND
GTKQSLTEKQAKELRELKEGHNVLHNLNNRDRQIKEIQASFEACKSQPVHATKKHLKPVE
VLPLLPYFDRYDDQYVVANFDGEPTVDAEMFGKMPKSIREDLEGKAVMKSFTATGSDPDK
PERFLGYMVPSTEELSKDIYDEEEDVSFSWVREYNWDVKGEDPDELSTYLVTFDDDAARY
LPLPTKLALRKRRAKEGRTQEDGEQFVQPGKLTVRRRDVTAVIERKESMDYSYFRSGPSR
SERHESDIEVEEQEAMDHEDVGDDQVGHYSGEEDYMSE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttaccggccataccccccaccacagcaagcatcatttgcacctcctccagct
caagccccacttccgccactaccacatcgaccccaatcccttgggaatcagtattctcaa
aattggggctctgccccccctccttactctcaaaactatgcacaagcgccttctaatcct
aatttccaacattcaagttacaatgcagctagtcatcaatatcaacatcccccaccactg
ccgcatcagcaacagcagcaatacccatttcagcctccaccaccgccacctgattcatta
tatccgcctccaccgcctccacctccaagtagccaaaattcagttgataatgcccatcaa
cagtattacccgtcttcacaatactctcaattcagccaacagccccctttgcaaccacca
cctccacccccacccccaccatcttctccgcctcctaattcatcagcccctcctcctcca
cccccaccatcatctcccccccctccacctcgtcagattaaagagagtgggggagaaaga
gttaagcatgatagagatagaagggcagcaaaagaggggaataaccacttttcgtctagg
cagccgaagcctccagttcctcctggtcctgtgaagaaagctaacggggctccagggaga
atggagactgaagaggaaaggaggttgaggaagaaaagggaaatggagaagcaaaagcta
gtagacaggcataaacagcacatgaaagagacacagaatcggccaaagcaaccccaggtt
ttgcctcctggagcaaaagctcatttgtcaatttcagggtctaggataggtgagagacgg
gctactccggttattggtggtgacagggatgaaaacccgatgaagaggcagacagcattt
atgtgcaggatgaagttccggaatgaacttcctgacccgtcttcgcagccaaagcttatg
aatttaaatagagacaaggatagatttactcggtatactatcacgtcattggagaaaatg
cataagccaaagttatatgttgaacctgatcttggcattccacttgacctccttgatctc
agtgtttacaaccctcccgtagagagatttcctcttgctccagaagatgaagagttgcta
cgtgatgatgaggcagcgaccccgttgaagagagatggaattaagaggaaagaacgccct
agtgatcaaggtgtctcttggcttgttaagacgcagtatatttctccactgagtaatgat
gggaccaaacagtctttgactgaaaaacaagcaaaggaattgcgtgaattgaaggaaggc
cacaatgtcctgcataatttaaacaatagggatagacaaattaaagaaatccaagcatcg
tttgaggcttgcaaatcacagcctgtacatgcaaccaagaaacatttgaaacctgtggag
gttctaccgttgcttccttactttgatcgttatgatgaccaatatgttgttgccaacttc
gatggggaacctaccgttgacgcagagatgttcggcaaaatgcccaaatctattcgcgag
gatcttgaaggaaaggctgtaatgaaaagttttaccgcaacaggttctgatcctgataaa
cctgaacgatttttgggctacatggtcccatcgacagaagagctatcgaaggacatttat
gatgaagaggaagatgtctccttctcttgggtccgagaatataattgggatgtcaaagga
gaagaccctgatgaactctcaacataccttgtgacatttgatgacgatgctgctcgctac
ttgcctcttccgacaaaacttgcattgagaaaaaggagggcaaaggaaggcaggactcaa
gaagacggagagcagtttgtgcaacccggcaagctaactgtcagacgaagagacgttact
gctgttattgagaggaaagaatcaatggattattcctacttcagatcaggcccatcgaga
tcagaaagacatgaatctgatattgaagtggaggagcaagaagctatggatcatgaagat
gtcggggacgatcaagtgggacattacagtggagaggaagattatatgtccgaatga
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